Escherichia coli O22:H8 154 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O22:H8 154 RM systems
Ref: Marques da Silva,W. et al. unpublished
REBASE ref # 34566
| Sequence length: | GenBank #: | |
| Chromosome: | 5,520,578 bp | CP067426 |
| plasmid p118: | 118,340 bp | CP067431 |
| plasmid pO157: | 92,972 bp | CP067430 |
REBASE acronym: Ecos154
Org_num: 58520
All begin JI426_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4567 | 322 aa hypothetical protein | |||
| 4568 | R | SflN101ORF11675P (99% identity) | CCANNNNNNNNNTTGG | Ecos154ORF4569P |
| 4569 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Ecos154ORF4569P |
| 4570 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Ecos154ORF4569P |
| 4571 | endoribonuclease SymE | |||
| 4613 | 128 aa hypothetical protein | |||
| 4614 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.Ecos154ORF4614P |
| 4615 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Ecos154ORF4614P |
| 4616 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 442 | DamX, an inner membrane protein involved in bile | |||
| 443 | M | M.UbaC1152DamP (99% identity) | GATC | M.Ecos154DamP |
| 444 | ribulose-phosphate 3-epimerase | |||
| 1440 | 98 aa hypothetical protein | |||
| 1441 | M | M.EcoC9703ORF1235P (100% identity) | M.Ecos154ORF1441P | |
| 1442 | translation inhibitor protein RaiA | |||
| 1534 | 64 aa hypothetical protein | |||
| 1535 | M | M.EcoL09ORF12250P (100% identity) | M.Ecos154ORF1535P | |
| 1536 | 83 aa hypothetical protein | |||
| 2191 | metal-dependent phosphohydrolase | |||
| 2192 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Ecos154DcmP |
| 2193 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Ecos154DcmP |
| 2194 | Permease of the drug/metabolite transporter | |||
| 3037 | cell envelope integrity protein TolA | |||
| 3040 | M | M.EcoUC4224ORF24495P (100% identity) | M.Ecos154ORF3040P | |
| 3041 | 65 aa hypothetical protein | |||
| 3374 | Shiga-like toxin II subunit A | |||
| 3378 | M | M.Eco3311ORF15280P (100% identity) | M.Ecos154ORF3378P | |
| 3379 | 65 aa hypothetical protein | |||
| 3515 | holin | |||
| 3516 | M | M.Eco26776ORF4090P (100% identity) | M.Ecos154ORF3516P | |
| 3517 | 112 aa hypothetical protein | |||
| 4609 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 4610 | R | SflN101ORF11875P (100% identity) | Ecos154ORF4610P | |
| 4611 | 5-methylcytosine-specific restriction enzyme B | |||
| 4900 | Outer membrane protein PagN | |||
| ??? | R | EcoR33ORF23475P (100% identity) | GAAC | Ecos154ORF4901P |
| 4902 | 94 aa hypothetical protein | |||
| plasmid p118 | ||||
| 5517 | DUF1281 domain-containing protein | |||
| 5518 | M | M.SflN92ORF24820P (100% identity) | M.Ecos154ORF5518P | |
| 5519 | cytoplasmic protein | |||
| plasmid pO157 | ||||
| 5475 | glutaminyl-tRNA synthetase | |||
| 5476 | M | M.EcoE2863ORF5533P (99% identity) | M.Ecos154ORF5476P | |
| 5477 | recombination associated protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4571 | endoribonuclease SymE | |||
| ??? | R | SflN101GmrSP (100% identity) | Ecos154GmrSP | |
| 4574 | DUF1127 domain-containing protein | |||
| 4610 | HNH endonuclease | |||
| 4611 | R | SflN101McrBP (100% identity) | Ecos154McrBP | |
| 4612 | R | SflN101McrCP (100% identity) | Ecos154McrCP | |
| 4613 | 128 aa hypothetical protein | |||