Escherichia coli isolate 162 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli isolate 162 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 4,814,770 bp | OW849377 |
| plasmid P2: | 110,667 bp | OW849379 |
| plasmid P4: | 40,408 bp | OW849381 |
REBASE acronym: Ecoi162
Org_num: 58524
All begin AI2703V1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid P2 | ||||
| 4670 | DNA polymerase III subunit theta | |||
| 4671 | M | M.EcoMY18ORF24050P (100% identity) | GAANNNNNNTAYG | M.Ecoi162ORF4671P |
| 4672 | S | S.EcoPTE6ORF23405P (100% identity) | GAANNNNNNTAYG | S.Ecoi162ORF4671P |
| 4673 | R | EcoGD31ORF25740P (99% identity) | GAANNNNNNTAYG | Ecoi162ORF4671P |
| 4674 | 136 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 336 | Cell division protein DamX | |||
| 337 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecoi162DamP |
| 338 | Ribulose-phosphate 3-epimerase | |||
| 1720 | 231 aa hypothetical protein | |||
| 1721 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Ecoi162DcmP |
| 1722 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Ecoi162DcmP |
| 1723 | inner membrane transporter YedA | |||
| 2843 | 273 aa hypothetical protein | |||
| 2844 | M | M.EcoS138ORF30180P (100% identity) | M.Ecoi162ORF2844P | |
| 2845 | 75 aa hypothetical protein | |||
| 4064 | 71 aa hypothetical protein | |||
| 4065 | M | M.Sso63633ORF22290P (100% identity) | M.Ecoi162ORF4065P | |
| 4066 | 67 aa hypothetical protein | |||
| 4072 | LexA repressor | |||
| 4073 | M | M.Eph460ORF45P (100% identity) | GATC | M.Ecoi162ORF4073P |
| 4074 | 162 aa hypothetical protein | |||
| plasmid P4 | ||||
| 4821 | 190 aa hypothetical protein | |||
| 4822 | R | Sma31ORF25925P (96% identity) | CTCGAG | Ecoi162ORF4822P |
| 4823 | 82 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid P2 | ||||
| 4683 | 76 aa hypothetical protein | |||
| 4684 | M | M.Sso524ORF460P (100% identity) | GATC | M.Ecoi162ORF4684P |
| 4685 | 269 aa hypothetical protein | |||