|
Putative Klebsiella pneumoniae isolate 405 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
Sequence length: | GenBank #: | |
chromosome main: | 5,441,253 bp | OW849405 |
chromosome main: | 5,451,483 bp | OW848816 |
chromosome main: | 5,452,120 bp | OW848868 |
chromosome main: | 5,530,992 bp | OW967765 |
chromosome main: | 5,403,838 bp | OW967029 |
chromosome main: | 5,457,247 bp | OW848845 |
chromosome main: | 5,499,978 bp | OW968283 |
chromosome main: | 5,536,953 bp | OW848862 |
chromosome main: | 5,416,465 bp | OW849226 |
chromosome main: | 5,273,511 bp | OW967381 |
chromosome main: | 5,481,599 bp | OW849325 |
chromosome main: | 5,446,955 bp | OW969761 |
chromosome main: | 5,451,465 bp | OW969870 |
plasmid P1: | 224,789 bp | OW969871 |
plasmid P1: | 247,964 bp | OW967030 |
plasmid P1: | 184,932 bp | OW968284 |
plasmid P1: | 194,000 bp | OW849227 |
plasmid P1: | 248,007 bp | OW849326 |
plasmid P1: | 188,493 bp | OW848817 |
plasmid P1: | 240,627 bp | OW849406 |
plasmid P1: | 225,970 bp | OW848846 |
plasmid P1: | 247,179 bp | OW848863 |
plasmid P1: | 188,579 bp | OW848869 |
plasmid P1: | 236,630 bp | OW969762 |
plasmid P2: | 111,043 bp | OW848818 |
plasmid P2: | 83,352 bp | OW969763 |
plasmid P2: | 110,360 bp | OW849327 |
plasmid P2: | 190,092 bp | OW967031 |
plasmid P2: | 96,511 bp | OW967383 |
plasmid P2: | 111,043 bp | OW848870 |
REBASE acronym: Kpni405b
Org_num: 58723
All begin AI2585V1_, AI2585V1_REPA, AI2592V1_, AI2592V1_REPA, AI2595V1_, AI2595V1_REPA, AI2600V1_, AI2600V1_REPA, AI2621V1_, AI2622V1_, AI2622V1_REPA, AI2670V1_, AI2670V1_REPA, AI2677V1_, AI2677V1_REPA, AI2800V1_, AI2800V1_REPA, AI2862V1_, AI2862V1_REPA, AI2921V1_, AI2921V1_REPA, AI2967V1_, AI2967V1_REPA, AN2343V1_, AN2343V1_REPA
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
plasmid P2 | ||||
5382 | 621 aa hypothetical protein | |||
5383 | M | M.Kqu610ORF27150P (100% identity) | M.Kpni405hORF5383P | |
5384 | S | S.Kqu610ORF27150P (100% identity) | S.Kpni405hORF5383P | |
5385 | R | Kqu610ORF27150P (100% identity) | Kpni405hORF5383P | |
5386 | 71 aa hypothetical protein | |||
plasmid P2 | ||||
5297 | 621 aa hypothetical protein | |||
5298 | M | M.Kpni405ORF5302P (100% identity) | GAGNNNNNNTAYG | M.Kpni405aORF5298P |
5299 | S | S.Kpni405ORF5302P (100% identity) | GAGNNNNNNTAYG | S.Kpni405aORF5298P |
5300 | R | Kpni405ORF5302P (100% identity) | GAGNNNNNNTAYG | Kpni405aORF5298P |
5301 | 71 aa hypothetical protein | |||
plasmid P2 | ||||
5301 | 621 aa hypothetical protein | |||
5302 | M | M.Kpni405aORF5298P (100% identity) | GAGNNNNNNTAYG | M.Kpni405ORF5302P |
5303 | S | S.Kpni405aORF5298P (100% identity) | GAGNNNNNNTAYG | S.Kpni405ORF5302P |
5304 | R | Kpni405aORF5298P (100% identity) | GAGNNNNNNTAYG | Kpni405ORF5302P |
5305 | 71 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome main | ||||
355 | Cell division protein DamX | |||
356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405dDamP |
357 | Ribulose-phosphate 3-epimerase | |||
3794 | 192 aa hypothetical protein | |||
3795 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405dORF3795P | |
3796 | 101 aa hypothetical protein | |||
4440 | Beta-xylosidase | |||
4441 | R | Kpni405jORF4407P (100% identity) | Kpni405dORF4441P | |
4442 | 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin | |||
chromosome main | ||||
356 | Cell division protein DamX | |||
357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405aDamP |
358 | Ribulose-phosphate 3-epimerase | |||
1798 | 235 aa hypothetical protein | |||
1799 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405aDcmP |
1800 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405aDcmP | |
1801 | inner membrane transporter YedA | |||
3793 | 192 aa hypothetical protein | |||
3794 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405aORF3794P | |
3795 | 101 aa hypothetical protein | |||
chromosome main | ||||
356 | Cell division protein DamX | |||
357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405DamP |
358 | Ribulose-phosphate 3-epimerase | |||
1801 | 235 aa hypothetical protein | |||
1802 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405DcmP |
1803 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405DcmP | |
1804 | inner membrane transporter YedA | |||
3796 | 192 aa hypothetical protein | |||
3797 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405ORF3797P | |
3798 | 101 aa hypothetical protein | |||
chromosome main | ||||
134 | IS1 family transposase | |||
192 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405bORF192P |
193 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405bORF192P |
147 | 293 aa hypothetical protein CJD35_20465 | |||
417 | Cell division protein DamX | |||
418 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405bDamP |
419 | Ribulose-phosphate 3-epimerase | |||
1745 | 235 aa hypothetical protein | |||
1746 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405bDcmP |
1747 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405bDcmP | |
1748 | inner membrane transporter YedA | |||
148 | 293 aa hypothetical protein CJD35_20465 | |||
2557 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405bORF2558P |
2558 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405bORF2558P |
135 | IS1 family transposase | |||
3725 | 192 aa hypothetical protein | |||
3726 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405bORF3726P | |
3727 | 101 aa hypothetical protein | |||
136 | IS1 family transposase | |||
4078 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405bORF4078P |
4079 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405bORF4078P |
149 | 293 aa hypothetical protein CJD35_20465 | |||
chromosome main | ||||
356 | Cell division protein DamX | |||
357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405cDamP |
358 | Ribulose-phosphate 3-epimerase | |||
1736 | 235 aa hypothetical protein | |||
1737 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405cDcmP |
1738 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405cDcmP | |
1739 | inner membrane transporter YedA | |||
3755 | 192 aa hypothetical protein | |||
3756 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405cORF3756P | |
3757 | 101 aa hypothetical protein | |||
chromosome main | ||||
355 | Cell division protein DamX | |||
356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405gDamP |
357 | Ribulose-phosphate 3-epimerase | |||
1787 | 235 aa hypothetical protein | |||
1788 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405gDcmP |
1789 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405gDcmP | |
1790 | inner membrane transporter YedA | |||
3826 | 192 aa hypothetical protein | |||
3827 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405gORF3827P | |
3828 | 101 aa hypothetical protein | |||
chromosome main | ||||
369 | Cell division protein DamX | |||
370 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn405kDamP |
371 | Ribulose-phosphate 3-epimerase | |||
1805 | 235 aa hypothetical protein | |||
1806 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpn405kDcmP |
1807 | V | V.Kpni405jDcmP (100% identity) | V.Kpn405kDcmP | |
1808 | inner membrane transporter YedA | |||
3868 | 192 aa hypothetical protein | |||
3869 | M | M.Kpni405jORF3760P (100% identity) | M.Kpn405kORF3869P | |
3870 | 101 aa hypothetical protein | |||
chromosome main | ||||
356 | Cell division protein DamX | |||
357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405eDamP |
358 | Ribulose-phosphate 3-epimerase | |||
1409 | 322 aa hypothetical protein | |||
1410 | M | M.KpnyORFDP (98% identity) | M.Kpni405eORF1410P | |
1411 | Crossover junction endodeoxyribonuclease RusA | |||
1843 | 235 aa hypothetical protein | |||
1844 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405eDcmP |
1845 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405eDcmP | |
1846 | inner membrane transporter YedA | |||
3909 | 192 aa hypothetical protein | |||
3910 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405eORF3910P | |
3911 | 101 aa hypothetical protein | |||
chromosome main | ||||
355 | Cell division protein DamX | |||
356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405jDamP |
357 | Ribulose-phosphate 3-epimerase | |||
1781 | 235 aa hypothetical protein | |||
1782 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405jDcmP |
1783 | V | V.Kpni405hDcmP (100% identity) | V.Kpni405jDcmP | |
1784 | inner membrane transporter YedA | |||
3759 | 192 aa hypothetical protein | |||
3760 | M | M.Kpni405hORF3839P (100% identity) | M.Kpni405jORF3760P | |
3761 | 101 aa hypothetical protein | |||
chromosome main | ||||
356 | Cell division protein DamX | |||
357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405fDamP |
358 | Ribulose-phosphate 3-epimerase | |||
1702 | 235 aa hypothetical protein | |||
1703 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405fDcmP |
1704 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405fDcmP | |
1705 | inner membrane transporter YedA | |||
2906 | 845 aa hypothetical protein | |||
2907 | M | M.Kpn63991ORF15670P (99% identity) | M.Kpni405fORF2907P | |
2908 | 75 aa hypothetical protein | |||
4264 | 291 aa hypothetical protein | |||
4265 | M | M.EclBTORFBP (96% identity) | M.Kpni405fORF4265P | |
4266 | R | EclBTORFBP (98% identity) | R1.Kpni405fORF4265P | |
4267 | R | R2.SenWT5ORF20880P (73% identity) | R2.Kpni405fORF4265P | |
4268 | 33 aa hypothetical protein | |||
chromosome main | ||||
357 | Cell division protein DamX | |||
358 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405hDamP |
359 | Ribulose-phosphate 3-epimerase | |||
1832 | 235 aa hypothetical protein | |||
1833 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405hDcmP |
1834 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405hDcmP | |
1835 | inner membrane transporter YedA | |||
3838 | 192 aa hypothetical protein | |||
3839 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405hORF3839P | |
3840 | 101 aa hypothetical protein | |||
chromosome main | ||||
355 | Cell division protein DamX | |||
356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn405lDamP |
357 | Ribulose-phosphate 3-epimerase | |||
1782 | 235 aa hypothetical protein | |||
1783 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpn405lDcmP |
1784 | V | V.Kpni405jDcmP (100% identity) | V.Kpn405lDcmP | |
1785 | inner membrane transporter YedA | |||
3788 | 192 aa hypothetical protein | |||
3789 | M | M.Kpni405jORF3760P (100% identity) | M.Kpn405lORF3789P | |
3790 | 101 aa hypothetical protein | |||
4434 | Beta-xylosidase | |||
4435 | R | Kpni405jORF4407P (100% identity) | Kpn405lORF4435P | |
4436 | 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin | |||
chromosome main | ||||
355 | Cell division protein DamX | |||
356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn405mDamP |
357 | Ribulose-phosphate 3-epimerase | |||
1785 | 235 aa hypothetical protein | |||
1786 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpn405mDcmP |
1787 | V | V.Kpni405jDcmP (100% identity) | V.Kpn405mDcmP | |
1788 | inner membrane transporter YedA | |||
4465 | Beta-xylosidase | |||
4466 | R | Kpni405jORF4407P (100% identity) | Kpn405mORF4466P | |
4467 | 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin | |||
plasmid P1 | ||||
99 | 293 aa hypothetical protein CJD35_20465 | |||
5182 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn405mORF5183P |
5183 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn405mORF5183P |
94 | IS1 family transposase | |||
plasmid P1 | ||||
99 | 293 aa hypothetical protein CJD35_20465 | |||
5135 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405cORF5136P |
5136 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405cORF5136P |
93 | IS1 family transposase | |||
plasmid P1 | ||||
88 | IS1 family transposase | |||
5173 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn405kORF5173P |
5174 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn405kORF5173P |
91 | 293 aa hypothetical protein CJD35_20465 | |||
plasmid P1 | ||||
74 | IS1 family transposase | |||
5065 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405jORF5065P |
5066 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405jORF5065P |
77 | 293 aa hypothetical protein CJD35_20465 | |||
plasmid P1 | ||||
104 | 293 aa hypothetical protein CJD35_20465 | |||
5202 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405hORF5203P |
5203 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405hORF5203P |
98 | IS1 family transposase | |||
plasmid P1 | ||||
63 | IS1 family transposase | |||
5112 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405aORF5112P |
5113 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405aORF5112P |
66 | 293 aa hypothetical protein CJD35_20465 | |||
plasmid P1 | ||||
90 | IS1 family transposase | |||
5185 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405dORF5185P |
5186 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405dORF5185P |
96 | 293 aa hypothetical protein CJD35_20465 | |||
plasmid P1 | ||||
68 | 293 aa hypothetical protein CJD35_20465 | |||
5179 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405gORF5180P |
5180 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405gORF5180P |
62 | IS1 family transposase | |||
plasmid P1 | ||||
64 | IS1 family transposase | |||
5258 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405eORF5258P |
5259 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405eORF5258P |
70 | 293 aa hypothetical protein CJD35_20465 | |||
plasmid P1 | ||||
63 | IS1 family transposase | |||
5116 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405ORF5116P |
5117 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405ORF5116P |
66 | 293 aa hypothetical protein CJD35_20465 | |||
plasmid P1 | ||||
94 | 293 aa hypothetical protein CJD35_20465 | |||
5150 | R | YpsR1ORFAP (99% identity) | CCWGG | R2.Kpn405lORF5151P |
5151 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn405lORF5151P |
88 | IS1 family transposase | |||
plasmid P2 | ||||
5307 | 75 aa hypothetical protein | |||
??? | M | M.Kpni405ORFAP (100% identity) | M.Kpni405aORFAP | |
5309 | 277 aa hypothetical protein | |||
plasmid P2 | ||||
5253 | 76 aa hypothetical protein | |||
5254 | M | M.SmaQC11ORF52800P (100% identity) | M.Kpn405lORF5254P | |
5255 | 73 aa hypothetical protein | |||
plasmid P2 | ||||
5392 | 75 aa hypothetical protein | |||
5393 | M | M.Rpl13095ORF6118P (100% identity) | GATC | M.Kpni405hORF5393P |
5394 | 277 aa hypothetical protein | |||
plasmid P2 | ||||
5383 | DNA replication protein DnaC | |||
5384 | M | M.Kqu645ORF52040P (100% identity) | CCWGG | M.Kpni405cORF5384P |
5385 | R | Sen20597ORF9325P (100% identity) | CCWGG | Kpni405cORF5384P |
5386 | 82 aa hypothetical protein | |||
5398 | 250 aa hypothetical protein | |||
5399 | M | M.Kpn0112ORF28385P (98% identity) | M.Kpni405cORF5399P | |
5400 | 1126 aa hypothetical protein | |||
plasmid P2 | ||||
5096 | 76 aa hypothetical protein | |||
5097 | M | M.SmaQC11ORF52800P (100% identity) | M.Kpni405fORF5097P | |
5098 | 73 aa hypothetical protein | |||
plasmid P2 | ||||
5311 | 75 aa hypothetical protein | |||
??? | M | M.Kpni405aORFAP (100% identity) | M.Kpni405ORFAP | |
5313 | 277 aa hypothetical protein |