Escherichia coli 19SZHZ803Rt |
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Putative Escherichia coli 19SZHZ803Rt RM systems
Ref: Liu,B. et al. unpublished
REBASE ref # 34563
| Sequence length: | GenBank #: | |
| Chromosome: | 4,736,355 bp | CP080066 |
| plasmid p803Rt_IncX1: | 97,038 bp | CP080067 |
| plasmid p803Rt_IncY: | 39,170 bp | CP080068 |
REBASE acronym: Eco803Rt
Org_num: 58514
All begin KZO14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17415 | GTPase family protein | |||
| 17420 | M | M.EcosE1ORFHP (93% identity) | M.Eco803RtORF17420P | |
| 17425 | S | S.EcosE1ORFHP (100% identity) | S.Eco803RtORF17420P | |
| 17430 | R | EcosE1ORFHP (96% identity) | Eco803RtORF17420P | |
| 17435 | transposase domain-containing protein | |||
| 17685 | toll/interleukin-1 receptor domain-containing | |||
| 17690 | R | Eco49610ORF17760P (100% identity) | Eco803RtORF17695P | |
| 17695 | M | M.KpnS1651ORFBP (100% identity) | M.Eco803RtORF17695P | |
| 17700 | S | S.EcoS43ORF9365P (99% identity) | S.Eco803RtORF17695P | |
| 17705 | SIR2 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1980 | cell division protein DamX | |||
| 1985 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco803RtDamP |
| 1990 | ribulose-phosphate 3-epimerase | |||
| 8970 | phosphohydrolase | |||
| 8975 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco803RtDcmP |
| 8980 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco803RtDcmP |
| 8985 | drug/metabolite exporter YedA | |||
| plasmid p803Rt_IncX1 | ||||
| 22945 | RM | EcoRC2ORF970008P (100% identity) | Eco803RtORF22945P | |
| 22950 | DEAD/DEAH box helicase | |||
| plasmid p803Rt_IncY | ||||
| 23165 | IS1 family transposase | |||
| 23170 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Eco803RtORF23170P |
| 23175 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco803RtORF23170P |
| 23180 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17545 | IS5 family transposase | |||
| 17550 | R | SflN97McrCP (100% identity) | Eco803RtMcrCP | |
| 17555 | R | SflN97McrBP (100% identity) | Eco803RtMcrBP | |
| 17560 | zinc-ribbon domain-containing protein | |||