Escherichia coli PBP5 |
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Putative Escherichia coli PBP5 RM systems
Ref: Kan,A. et al. unpublished
REBASE ref # 34443
Complete sequence: 5,050,942 bp
GenBank #: CP069621
REBASE acronym: EcoPBP5
Org_num: 57952
All begin JSQ88_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2270 | holin | |||
| 2275 | M | M.EcoZE21ORF10265P (100% identity) | M.EcoPBP5ORF2275P | |
| 2280 | TrmB family transcriptional regulator | |||
| 2310 | RusA family crossover junction | |||
| 2315 | M | M.EcoZE21ORF10305P (99% identity) | M.EcoPBP5ORF2315P | |
| 2320 | conserved phage C-terminal domain-containing | |||
| 2825 | drug/metabolite exporter YedA | |||
| 2830 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.EcoPBP5DcmP |
| 2835 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoPBP5DcmP |
| 2840 | phosphohydrolase | |||
| 10070 | DNA-binding transcriptional regulator Fis | |||
| 10075 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoPBP5ORF10075P |
| 10080 | DUF2556 family protein | |||
| 10670 | ribulose-phosphate 3-epimerase | |||
| 10675 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPBP5DamP |
| 10680 | cell division protein DamX | |||
| 15805 | helix-turn-helix domain-containing protein | |||
| 15810 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoPBP5ORF15810P |
| 15815 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoPBP5ORF15810P |
| 15820 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoPBP5ORF15810P |
| 15825 | McrC family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15820 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 15825 | R | EcosS9McrCP (100% identity) | EcoPBP5McrCP | |
| 15830 | restriction endonuclease | |||
| 15835 | IS3-like element ISEc52 family transposase | |||
| 15840 | R | EcosS3McrBP (72% identity) | EcoPBP5McrBP | |
| 15845 | glycosyltransferase family 2 protein | |||
| 16170 | type I restriction-modification system subunit | |||
| 16175 | R | Ecou021MrrP (100% identity) | EcoPBP5MrrP | |
| 16180 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22590 | recombination protein NinB | |||
| 22595 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoPBP5ORF22595P |
| 22600 | NinE family protein | |||