Escherichia coli JH51 |
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Putative Escherichia coli JH51 RM systems
Ref: Ma,J. unpublished
REBASE ref # 27651
| Sequence length: | GenBank #: | |
| Chromosome: | 4,730,648 bp | CP095454 |
| plasmid pJH51-1: | 246,773 bp | CP095455 |
| plasmid pJH51-2: | 117,764 bp | CP095456 |
REBASE acronym: EcoJH51
Org_num: 57713
All begin MWN27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8925 | helix-turn-helix domain-containing protein | |||
| 8935 | R | EcoEC98ORF23975P (86% identity) | EcoJH51ORF8935P | |
| 8940 | M48 family metallopeptidase | |||
| 14630 | GTPase family protein | |||
| 14635 | M | M.SflN97ORF14060P (100% identity) | M.EcoJH51ORF14635P | |
| 14640 | S | S.SflN97ORF14060P (100% identity) | S.EcoJH51ORF14635P | |
| 14645 | R | SflN97ORF14060P (100% identity) | EcoJH51ORF14635P | |
| 14650 | IS1 family transposase | |||
| 19640 | restriction endonuclease | |||
| 19645 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoJH51ORF19645P |
| 19650 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoJH51ORF19645P |
| 19655 | R | EcoJEc21ORF19480P (100% identity) | RTACNNNNGTG | EcoJH51ORF19645P |
| 19660 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoJH51DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoJH51ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 8630 | HD domain-containing protein | |||
| 8635 | M | M.EcoC9098DcmP (99% identity) | CCWGG | M.EcoJH51DcmP |
| 8640 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoJH51DcmP |
| 8645 | drug/metabolite exporter YedA | |||
| 10750 | DUF977 family protein | |||
| 10755 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoJH51ORF10755P | |
| 10760 | 139 aa hypothetical protein | |||
| 15235 | replication endonuclease | |||
| 15240 | M | M.EcoSCU306ORF6255P (100% identity) | GATC | M.EcoJH51ORF15240P |
| 15245 | TraR/DksA family transcriptional regulator | |||
| plasmid pJH51-1 | ||||
| 23640 | 55 aa hypothetical protein | |||
| 23645 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoJH51ORF23645P |
| 23650 | thermonuclease family protein | |||
| 24085 | 48 aa hypothetical protein | |||
| 24090 | M | M.YpsF1ORFBP (100% identity) | M.EcoJH51ORF24090P | |
| 24095 | 202 aa hypothetical protein | |||
| 24200 | DNA-binding protein | |||
| 24205 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoJH51ORF24205P |
| 24210 | 284 aa hypothetical protein | |||
| plasmid pJH51-2 | ||||
| 24595 | 103 aa hypothetical protein | |||
| 24600 | M | M.SflLIN4ORF23595P (100% identity) | M.EcoJH51ORF24600P | |
| 24605 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14810 | IS5 family transposase | |||
| 14815 | R | SflN97McrCP (100% identity) | EcoJH51McrCP | |
| 14820 | R | SflN97McrBP (100% identity) | EcoJH51McrBP | |
| 14825 | zinc-ribbon domain-containing protein | |||
| 19635 | BrnT family toxin | |||
| 19640 | R | Ecou021MrrP (100% identity) | EcoJH51MrrP | |
| 19645 | type I restriction-modification system subunit | |||