Escherichia coli EC6868 |
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Putative Escherichia coli EC6868 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 34225
| Sequence length: | GenBank #: | |
| Chromosome: | 5,252,652 bp | CP095083 |
| plasmid pEC6868-1: | 144,934 bp | CP095084 |
REBASE acronym: Eco6868
Org_num: 57213
All begin MUK76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21910 | adenine/cytosine-specific restriction | |||
| 21915 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco6868ORF21920P |
| 21920 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco6868ORF21920P |
| 21925 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco6868ORF21920P |
| 21930 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1920 | cell division protein DamX | |||
| 1925 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco6868DamP |
| 1930 | ribulose-phosphate 3-epimerase | |||
| 2450 | DUF2556 family protein | |||
| 2455 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco6868ORF2455P |
| 2460 | DNA-binding transcriptional regulator Fis | |||
| 6425 | replication endonuclease | |||
| 6430 | M | M.Eco4CORF8240P (100% identity) | M.Eco6868ORF6430P | |
| 6435 | DUF5405 family protein | |||
| 9855 | phosphohydrolase | |||
| 9860 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco6868DcmP |
| 9865 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Eco6868DcmP |
| 9870 | drug/metabolite exporter YedA | |||
| 13535 | tellurite resistance protein | |||
| 13555 | M | M.SflC32ORFBP (100% identity) | M.Eco6868ORF13555P | |
| 13560 | TrmB family transcriptional regulator | |||
| 14545 | NinE family protein | |||
| 14550 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco6868ORF14550P |
| 14555 | recombination protein NinB | |||
| plasmid pEC6868-1 | ||||
| 25680 | 103 aa hypothetical protein | |||
| 25685 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco6868ORF25685P |
| 25690 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21905 | GTPase | |||
| 21910 | R | Ssp28760MrrP (100% identity) | Eco6868MrrP | |
| 21915 | type I restriction-modification system | |||
| 21930 | endoribonuclease SymE | |||
| 21935 | R | SenHNK130McrBP (100% identity) | Eco6868McrBP | |
| 21940 | R | SenHNK130McrCP (100% identity) | Eco6868McrCP | |