Escherichia coli isolate EC5654 |
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Putative Escherichia coli isolate EC5654 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 34232
| Sequence length: | GenBank #: | |
| Chromosome: | 5,205,884 bp | CP095086 |
| plasmid pEC5654: | 128,309 bp | CP095087 |
REBASE acronym: Eco5654
Org_num: 57234
All begin MUK77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18935 | transcription factor | |||
| 18940 | M | M.EcoF16024ORF18990P (100% identity) | CCAYNNNNNGTNG | M.Eco5654ORF18940P |
| 18945 | S | S.EcoF16024ORF18990P (100% identity) | CCAYNNNNNGTNG | S.Eco5654ORF18940P |
| 18950 | DUF4433 domain-containing protein | |||
| 18955 | macro domain-containing protein | |||
| 18960 | R | EcoF16024ORF18990P (100% identity) | CCAYNNNNNGTNG | Eco5654ORF18940P |
| 18965 | M48 family metallopeptidase | |||
| 20675 | restriction endonuclease | |||
| 20680 | M | M.EcoW072ORF20660P (100% identity) | GGYANNNNNGTNG | M.Eco5654ORF20680P |
| 20685 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco5654ORF20680P |
| 20690 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco5654ORF20680P |
| 20695 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1710 | cell division protein DamX | |||
| 1715 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco5654DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.Eco5654ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 6725 | DUF1382 family protein | |||
| 6730 | M | M.Sdy9753ORFBP (100% identity) | M.Eco5654ORF6730P | |
| 6735 | PerC family transcriptional regulator | |||
| 16930 | 71 aa hypothetical protein | |||
| 16935 | M | M.Sen21974ORF23385P (100% identity) | M.Eco5654ORF16935P | |
| 16940 | 145 aa hypothetical protein | |||
| 21225 | conjugal transfer protein TraG N-terminal | |||
| 21230 | M | M.EcosS3ORF15775P (100% identity) | M.Eco5654ORF21230P | |
| 21235 | R | EcosS3ORF15775P (100% identity) | Eco5654ORF21230P | |
| 21240 | response regulator receiver domain | |||
| plasmid pEC5654 | ||||
| 25220 | 103 aa hypothetical protein | |||
| 25225 | M | M.Ecos69ORF26765P (100% identity) | M.Eco5654ORF25225P | |
| 25230 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20670 | 34 aa hypothetical protein | |||
| 20675 | R | Ecost88MrrP (100% identity) | Eco5654MrrP | |
| 20680 | type I restriction-modification system subunit | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13845 | NinE family protein | |||
| 13850 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco5654ORF13850P |
| 13855 | recombination protein NinB | |||