Escherichia coli Ec-042-T5-ESBL |
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Putative Escherichia coli Ec-042-T5-ESBL RM systems
Ref: Moser,A.I. et al. unpublished
REBASE ref # 34227
Complete sequence: 4,667,304 bp
GenBank #: CP086532
REBASE acronym: Eco042T5
Org_num: 57218
All begin LNN41_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1925 | cell division protein DamX | |||
| 1930 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco042T5DamP |
| 1935 | ribulose-phosphate 3-epimerase | |||
| 2550 | DUF2556 family protein | |||
| 2555 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco042T5ORF2555P |
| 2560 | DNA-binding transcriptional regulator Fis | |||
| 5750 | tyrosine-type recombinase/integrase | |||
| 5755 | M | M.Ecoi64ORF2425P (100% identity) | M.Eco042T5ORF5755P | |
| 5760 | AAA family ATPase | |||
| 5835 | PerC family transcriptional regulator | |||
| 5840 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.Eco042T5ORF5840P |
| 5845 | LexA family transcriptional regulator | |||
| 5880 | TrmB family transcriptional regulator | |||
| 5885 | M | M.Sso63633ORF22290P (100% identity) | M.Eco042T5ORF5885P | |
| 5890 | phage lysis protein EssD | |||
| 9200 | phosphohydrolase | |||
| 9205 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco042T5DcmP |
| 9210 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco042T5DcmP |
| 9215 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9055 | shufflon system plasmid conjugative transfer | |||
| 9060 | R | Sensp14178ORF9290P (100% identity) | CAAACC | Eco042T5ORF9065P |
| 9065 | M | M.Sensp14178ORF9290P (100% identity) | CAAACC | M.Eco042T5ORF9065P |
| 9070 | integrase arm-type DNA-binding domain-containing | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13125 | NADP-dependent isocitrate dehydrogenase | |||
| 13130 | R | EcosEC27McrCP (100% identity) | Eco042T5McrCP | |
| 13135 | R | EcoteDMcrBP (100% identity) | Eco042T5McrBP | |
| 13140 | recombinase family protein | |||