Escherichia coli TUM20902 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli TUM20902 RM systems
Ref: Tsutsumi,Y. et al. unpublished
REBASE ref # 34065
| Sequence length: | GenBank #: | |
| Chromosome: | 4,906,821 bp | AP025662 |
| plasmid pMTY20902_IncFI: | 170,915 bp | AP025663 |
REBASE acronym: Eco20902
Org_num: 56811
All begin TUM20902_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38170 | restriction endonuclease | |||
| 38180 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco20902ORF38190P |
| 38190 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco20902ORF38190P |
| 38200 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco20902ORF38190P |
| 38210 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3690 | cell division protein DamX | |||
| 3700 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco20902DamP |
| 3710 | ribulose-phosphate 3-epimerase | |||
| 4670 | acrEF/envCD operon transcriptional regulator | |||
| 4680 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco20902ORF4680P |
| 4690 | DNA-binding protein Fis | |||
| 18150 | phosphohydrolase | |||
| 18160 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.Eco20902DcmP |
| 18170 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Eco20902DcmP |
| 18180 | multidrug transporter | |||
| 26240 | protein ninX | |||
| 26250 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco20902ORF26250P |
| 26260 | protein ninB | |||
| plasmid pMTY20902_IncFI | ||||
| 46040 | 73 aa hypothetical protein | |||
| 46050 | M | M.SflN92ORF24820P (100% identity) | M.Eco20902ORF46050P | |
| 46060 | 145 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38160 | GTPase | |||
| 38170 | R | EcosS1MrrP (100% identity) | Eco20902MrrP | |
| 38180 | type I restriction-modification system | |||
| 38210 | endoribonuclease SymE | |||
| ??? | R | EcoST69GmrSDP (100% identity) | Eco20902GmrSDP | |
| 38230 | 306 aa hypothetical protein | |||