Escherichia coli EC11 |
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Putative Escherichia coli EC11 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,798,689 bp | CP060938 |
| plasmid pEC11-2: | 116,611 bp | CP060939 |
| plasmid pEC11-3: | 55,175 bp | CP060940 |
REBASE acronym: Eco11
Org_num: 56784
All begin H9198_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pEC11-2 | ||||
| 23140 | ISL3 family transposase | |||
| 23145 | R | Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | Eco11ORF23155P |
| 23150 | S | S.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | S.Eco11ORF23155P |
| 23155 | M | M.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | M.Eco11ORF23155P |
| 23160 | phage integrase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4685 | cell division protein DamX | |||
| 4690 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11DamP |
| 4695 | ribulose-phosphate 3-epimerase | |||
| 5320 | DUF2556 family protein | |||
| 5325 | M | M.Sso8ORF2545P (99% identity) | ATGCAT | M.Eco11ORF5325P |
| 5330 | DNA-binding transcriptional regulator Fis | |||
| 8565 | ogr/Delta-like zinc finger family protein | |||
| 8570 | R | R1.Eco102CCORF11200P (100% identity) | R1.Eco11ORF8580P | |
| 8575 | 242 aa hypothetical protein | |||
| 8580 | M | M.EcoST70ORF6140P (100% identity) | M.Eco11ORF8580P | |
| 8585 | tyrosine-type recombinase/integrase | |||
| 10770 | PerC family transcriptional regulator | |||
| ??? | M | M.EcoT167ORFEP (100% identity) | GATC | M.Eco11ORF10775P |
| 10780 | LexA family transcriptional regulator | |||
| 22575 | phage lysis protein EssD | |||
| 22580 | M | M.EcoYJ4ORFHP (100% identity) | M.Eco11ORF22580P | |
| 22585 | 67 aa hypothetical protein | |||
| 22950 | HNH endonuclease | |||
| 22955 | R | Sso8ORF19860P (100% identity) | Eco11ORF22955P | |
| 22960 | 55 aa hypothetical protein | |||
| plasmid pEC11-2 | ||||
| 23205 | 66 aa hypothetical protein | |||
| 23210 | M | M.SmaQC11ORF52800P (100% identity) | M.Eco11ORF23210P | |
| 23215 | 73 aa hypothetical protein | |||
| plasmid pEC11-3 | ||||
| 23750 | 103 aa hypothetical protein | |||
| 23755 | M | M.SspPIBORF23080P (100% identity) | M.Eco11ORF23755P | |
| 23760 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18090 | replication endonuclease | |||
| 18095 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco11ORF18095P |
| 18100 | TraR/DksA family transcriptional regulator | |||