Escherichia coli EC13 |
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Putative Escherichia coli EC13 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,710,280 bp | CP060928 |
| plasmid pEC13-3: | 94,661 bp | CP060930 |
REBASE acronym: EcoEC13
Org_num: 56786
All begin H9200_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5550 | drug/metabolite exporter YedA | |||
| 5555 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoEC13DcmP |
| 5560 | M | M.EcosEC7DcmP (100% identity) | CCWGG | M.EcoEC13DcmP |
| 5565 | phosphohydrolase | |||
| 12045 | DNA-binding transcriptional regulator Fis | |||
| 12050 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoEC13ORF12050P |
| 12055 | DUF2556 family protein | |||
| 17445 | McrC family protein | |||
| 17450 | R | SflSTLE4ORF19250P (100% identity) | EcoEC13ORF17450P | |
| 17455 | HNH endonuclease | |||
| 17825 | PerC family transcriptional regulator | |||
| 17830 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoEC13ORF17830P |
| 17835 | LexA family transcriptional regulator | |||
| 17865 | 67 aa hypothetical protein | |||
| 17870 | M | M.Sso63633ORF22290P (99% identity) | M.EcoEC13ORF17870P | |
| 17875 | phage lysis protein EssD | |||
| 22255 | TraR/DksA family transcriptional regulator | |||
| 22260 | M | M.Ecop10BORF14750P (100% identity) | GATC | M.EcoEC13ORF22260P |
| 22265 | replication endonuclease | |||
| plasmid pEC13-3 | ||||
| 24040 | SPFH/Band 7/PHB domain protein | |||
| 24055 | M | M.EcoSTEFF1ORF24540P (99% identity) | M.EcoEC13ORF24055P | |
| 24060 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17435 | DUF4942 domain-containing protein | |||
| 17440 | R | SflSTLE4McrBP (100% identity) | EcoEC13McrBP | |
| 17445 | R | SflSTLE4McrCP (100% identity) | EcoEC13McrCP | |
| 17450 | HNH endonuclease | |||