Escherichia coli EC27 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli EC27 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,806,953 bp | CP060873 |
| plasmid pEC27-2: | 111,544 bp | CP060874 |
| plasmid pEC27-3: | 92,062 bp | CP060875 |
REBASE acronym: EcosEC27
Org_num: 56796
All begin H9210_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5705 | IS1 family transposase | |||
| 5710 | R | Sen12509ORF5865P (98% identity) | ACAYNNNNCTG | EcosEC27ORF5720P |
| 5715 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcosEC27ORF5720P |
| 5720 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcosEC27ORF5720P |
| 5725 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1925 | cell division protein DamX | |||
| 1930 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcosEC27DamP |
| 1935 | ribulose-phosphate 3-epimerase | |||
| 9325 | phosphohydrolase | |||
| 9330 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcosEC27DcmP |
| 9335 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcosEC27DcmP |
| 9340 | drug/metabolite exporter YedA | |||
| 19460 | phage lysis protein EssD | |||
| 19465 | M | M.Efe38C01ORF1055P (100% identity) | M.EcosEC27ORF19465P | |
| 19470 | 67 aa hypothetical protein | |||
| plasmid pEC27-2 | ||||
| 23550 | 73 aa hypothetical protein | |||
| 23555 | M | M.KpnVA569ORF28145P (100% identity) | M.EcosEC27ORF23555P | |
| 23560 | 102 aa hypothetical protein | |||
| plasmid pEC27-3 | ||||
| 23850 | 101 aa hypothetical protein | |||
| 23855 | M | M.SflFF3ORF25360P (100% identity) | SAY | M.EcosEC27ORF23855P |
| 23860 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13350 | isocitrate dehydrogenase | |||
| 13355 | R | EcosEC24McrCP (100% identity) | EcosEC27McrCP | |
| 13360 | R | EcoteDMcrBP (100% identity) | EcosEC27McrBP | |
| 13365 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14905 | replication endonuclease | |||
| 14910 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcosEC27ORF14910P |
| 14915 | TraR/DksA family transcriptional regulator | |||