Escherichia coli EC29 |
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Putative Escherichia coli EC29 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,887,629 bp | CP060867 |
| plasmid pEC29-3: | 87,603 bp | CP060869 |
| plasmid pEC29-NDM-5: | 147,459 bp | CP060868 |
REBASE acronym: EcosEC29
Org_num: 56797
All begin H9211_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2460 | 55 aa hypothetical protein | |||
| 2465 | R | Sso8ORF19860P (100% identity) | EcosEC29ORF2465P | |
| 2470 | HNH endonuclease | |||
| 4295 | PerC family transcriptional regulator | |||
| 4300 | M | M.Sso8ORF17910P (100% identity) | GATC | M.EcosEC29ORF4300P |
| 4305 | LexA family transcriptional regulator | |||
| 4535 | tyrosine-type recombinase/integrase | |||
| 4540 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.EcosEC29ORF4540P |
| 4545 | zinc ribbon domain-containing protein | |||
| 13065 | drug/metabolite exporter YedA | |||
| 13070 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcosEC29DcmP |
| 13075 | M | M.EcoeV01DcmP (100% identity) | CCWGG | M.EcosEC29DcmP |
| 13080 | phosphohydrolase | |||
| 15240 | RusA family crossover junction | |||
| 15245 | M | M.Kpn75ORF17070P (100% identity) | M.EcosEC29ORF15245P | |
| 15250 | helix-turn-helix domain-containing protein | |||
| 20160 | DNA-binding transcriptional regulator Fis | |||
| 20165 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcosEC29ORF20165P |
| 20170 | DUF2556 family protein | |||
| plasmid pEC29-3 | ||||
| 24360 | 104 aa hypothetical protein | |||
| 24365 | M | M.Sso866ORF27155P (100% identity) | M.EcosEC29ORF24365P | |
| 24370 | 73 aa hypothetical protein | |||
| plasmid pEC29-NDM-5 | ||||
| 23855 | 102 aa hypothetical protein | |||
| 23860 | M | M.KpnVA569ORF28145P (100% identity) | M.EcosEC29ORF23860P | |
| 23865 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22185 | 0 aa hypothetical protein | |||
| 22190 | R | EcoOR02AORF13715P (99% identity) | GTCTC | EcosEC29ORF22195P |
| 22195 | M | M.EcoOR02AORF13715P (100% identity) | GTCTC | M.EcosEC29ORF22195P |
| 22200 | AIPR family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4505 | recombinase family protein | |||
| 4510 | R | EcoNEC1GmrSDP (100% identity) | EcosEC29GmrSDP | |
| 4515 | DUF4113 domain-containing protein | |||