Escherichia coli 623214 |
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Putative Escherichia coli 623214 RM systems
Ref: Bird,M.T. et al. unpublished
REBASE ref # 33359
| Sequence length: | GenBank #: | |
| Chromosome: | 5,323,098 bp | CP091401 |
| plasmid p623214_2: | 6,760 bp | CP091403 |
REBASE acronym: Eco623214
Org_num: 56562
All begin EBM07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3845 | endoribonuclease SymE | |||
| 3850 | S | S.SspS13ORF3945P (69% identity) | S2.Eco623214ORF3865P | |
| 3855 | IS1-like element IS1B family transposase | |||
| 3860 | S | S.SspS13ORF3945P (29% identity) | S1.Eco623214ORF3865P | |
| 3865 | M | M.SspS13ORF3945P (100% identity) | M.Eco623214ORF3865P | |
| 3870 | R | SspS13ORF3945P (100% identity) | Eco623214ORF3865P | |
| 3875 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11480 | TrmB family transcriptional regulator | |||
| 11485 | M | M.Sso1093ORF10290P (100% identity) | A | M.Eco623214ORF11485P |
| 11500 | DUF3927 family protein | |||
| 15325 | drug/metabolite exporter YedA | |||
| 15330 | V | V.EcosPA11DcmP (100% identity) | V.Eco623214DcmP | |
| 15335 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco623214DcmP |
| 15340 | phosphohydrolase | |||
| 18380 | PerC family transcriptional regulator | |||
| 18385 | M | M.EcosE1ORFEP (100% identity) | GATC | M.Eco623214ORF18385P |
| 18390 | DUF1382 family protein | |||
| 23050 | DNA-binding transcriptional regulator Fis | |||
| 23055 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco623214ORF23055P |
| 23060 | DUF2556 family protein | |||
| 23585 | ribulose-phosphate 3-epimerase | |||
| 23590 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco623214DamP |
| 23595 | cell division protein DamX | |||
| 25435 | helix-turn-helix domain-containing protein | |||
| 25440 | M | M.KpnYN1ORFGP (89% identity) | M.Eco623214ORF25440P | |
| 25445 | 71 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p623214_2 | ||||
| 26540 | R | SenL0047ORF24180P (100% identity) | Eco623214ORF26555P | |
| 26545 | replication initiation protein | |||
| 26550 | Rop family plasmid primer RNA-binding protein | |||
| 26555 | M | M.SenL0047ORF24180P (100% identity) | M.Eco623214ORF26555P | |