Escherichia coli 623213 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 623213 RM systems
Ref: Bird,M.T. et al. unpublished
REBASE ref # 33359
| Sequence length: | GenBank #: | |
| Chromosome: | 4,897,771 bp | CP091387 |
| plasmid p623213_3: | 8,297 bp | CP091390 |
REBASE acronym: Eco623213
Org_num: 56561
All begin EBP16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3685 | endoribonuclease SymE | |||
| 3690 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.Eco623213ORF3695P |
| 3695 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.Eco623213ORF3695P |
| 3700 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco623213ORF3695P |
| 3705 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1260 | replication endonuclease | |||
| 1265 | M | M.SspS13ORF1655P (100% identity) | GTCGAC | M.Eco623213ORF1265P |
| 1270 | R | SspS13ORF1655P (100% identity) | GTCGAC | R1.Eco623213ORF1265P |
| 1275 | R | R1.SenXB08ORF22340P (100% identity) | GTCGAC | R2.Eco623213ORF1265P |
| 1280 | phage portal protein | |||
| 14805 | drug/metabolite exporter YedA | |||
| 14810 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco623213DcmP |
| 14815 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco623213DcmP |
| 14820 | phosphohydrolase | |||
| 21335 | DNA-binding transcriptional regulator Fis | |||
| 21340 | M | M.EcoSC3ORFAP (100% identity) | ATGCAT | M.Eco623213ORF21340P |
| 21345 | DUF2556 family protein | |||
| 21890 | ribulose-phosphate 3-epimerase | |||
| 21895 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco623213DamP |
| 21900 | cell division protein DamX | |||
| plasmid p623213_3 | ||||
| 24825 | R | Sso80ORF25465P (100% identity) | CCNGG | Eco623213ORF24830P |
| 24830 | M | M.SsoII (100% identity) | CCNGG | M.Eco623213ORF24830P |
| 24835 | Rop family plasmid primer RNA-binding protein | |||
| 24835 | Rop family plasmid primer RNA-binding protein | |||
| ??? | R | Sso80ORF25465P (100% identity) | CCNGG | Eco623213ORF24855P |
| 24855 | M | M.SsoII (95% identity) | CCNGG | M.Eco623213ORF24855P |
| 24820 | Rop family plasmid primer RNA-binding protein | |||