Escherichia coli STLEFF_47 |
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Putative Escherichia coli STLEFF_47 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
| Sequence length: | GenBank #: | |
| Chromosome: | 4,979,339 bp | CP058874 |
| plasmid unnamed3: | 67,224 bp | CP058877 |
REBASE acronym: EcoFF47
Org_num: 56639
All begin HZT32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20695 | restriction endonuclease | |||
| 20700 | M | M.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | M.EcoFF47ORF20700P |
| 20705 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.EcoFF47ORF20700P |
| 20710 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | EcoFF47ORF20700P |
| 20715 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2145 | cell division protein DamX | |||
| 2150 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoFF47DamP |
| 2155 | ribulose-phosphate 3-epimerase | |||
| 2745 | DUF2556 family protein | |||
| 2750 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoFF47ORF2750P |
| 2755 | DNA-binding transcriptional regulator Fis | |||
| 9195 | phosphohydrolase | |||
| 9200 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoFF47DcmP |
| 9205 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoFF47DcmP |
| 9210 | drug/metabolite exporter YedA | |||
| 13105 | DUF1737 domain-containing protein | |||
| 13125 | M | M.EcoW12E19ORF4775P (99% identity) | A | M.EcoFF47ORF13125P |
| 13130 | TrmB family transcriptional regulator | |||
| 15750 | NinE family protein | |||
| 15755 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoFF47ORF15755P |
| 15760 | recombination protein NinB | |||
| 18365 | phage lysis protein EssD | |||
| 18370 | M | M.SflN92ORF18235P (99% identity) | M.EcoFF47ORF18370P | |
| 18375 | 264 aa hypothetical protein | |||
| 20425 | phage lysis protein EssD | |||
| 20430 | M | M.Sso63633ORF22290P (100% identity) | M.EcoFF47ORF20430P | |
| 20435 | 67 aa hypothetical protein | |||
| 20460 | LexA family transcriptional regulator | |||
| 20465 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoFF47ORF20465P |
| 20470 | PerC family transcriptional regulator | |||
| 20890 | HNH endonuclease | |||
| 20895 | R | SflFF17ORF19275P (100% identity) | EcoFF47ORF20895P | |
| 20900 | 59 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 25425 | 97 aa hypothetical protein | |||
| 25430 | M | M.Xca80ORFEP (100% identity) | M.EcoFF47ORF25430P | |
| 25435 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20690 | BrnT family toxin | |||
| 20695 | R | EfeE4C07MrrP (100% identity) | EcoFF47MrrP | |
| 20700 | type I restriction-modification system subunit | |||