Escherichia coli A36 |
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Putative Escherichia coli A36 RM systems
Ref: Kang,Y. et al. Brief Bioinform 22 (4) (2021)
REBASE ref # 34039
Complete sequence: 5,109,615 bp
GenBank #: CP028739
REBASE acronym: EcoA36
Org_num: 56591
All begin AOY89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22535 | TIGR03761 family integrating conjugative element | |||
| 22540 | R | Ecos671ORFGP (96% identity) | GTANNNNNNGTCG | EcoA36IIIP |
| 22545 | M | M.Ecos671ORFGP (99% identity) | GTANNNNNNGTCG | M.EcoA36III |
| 22550 | S | S.EcoDEC8DORF4208P (100% identity) | GTANNNNNNGTCG | S.EcoA36III |
| 22555 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7825 | TrmB family transcriptional regulator | |||
| 7830 | M | M.Eco21E3C02ORF10715P (97% identity) | M.EcoA36ORF7830P | |
| 7845 | 127 aa hypothetical protein | |||
| 8380 | Com family DNA-binding transcriptional | |||
| 8385 | M | M.Ecor024ORF22975P (99% identity) | M.EcoA36ORF8385P | |
| 8390 | ribosome-associated inhibitor A | |||
| 11990 | phosphohydrolase | |||
| 11995 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoA36DcmP |
| 12000 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoA36DcmP |
| 12005 | drug/metabolite exporter YedA | |||
| 16270 | DUF1317 domain-containing protein | |||
| 16275 | M | M.EcoR65ORF6360P (99% identity) | M.EcoA36ORF16275P | |
| 16280 | 93 aa hypothetical protein | |||
| 23750 | Fis family transcriptional regulator | |||
| 23755 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoA36ORF23755P |
| 23760 | DUF2556 domain-containing protein | |||
| 24375 | ribulose-phosphate 3-epimerase | |||
| 24380 | M | M.SspPIBDamP (100% identity) | M.EcoA36DamP | |
| 24385 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3955 | DNA methyltransferase | |||
| 3960 | R | EcoSTEFF1MrrP (100% identity) | EcoA36MrrP | |
| 3965 | 95 aa hypothetical protein | |||