Escherichia coli SWHEFF_68 |
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Putative Escherichia coli SWHEFF_68 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
| Sequence length: | GenBank #: | |
| Chromosome: | 5,119,240 bp | CP055022 |
| plasmid unnamed1: | 40,757 bp | CP055023 |
REBASE acronym: EcoFF68
Org_num: 55392
All begin HUZ76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14820 | transcription factor | |||
| 14825 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.EcoFF68ORF14825P |
| 14830 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.EcoFF68ORF14825P |
| 14835 | DUF4433 domain-containing protein | |||
| 14840 | macro domain-containing protein | |||
| 14845 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | EcoFF68ORF14825P |
| 14850 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoFF68DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.Ecoppa2ORF6235P (100% identity) | ATGCAT | M.EcoFF68ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 9605 | phosphohydrolase | |||
| 9610 | M | M.Ecoppa2DcmP (100% identity) | CCWGG | M.EcoFF68DcmP |
| 9615 | V | V.Ecoppa2DcmP (100% identity) | V.EcoFF68DcmP | |
| 9620 | drug/metabolite exporter YedA | |||
| 20815 | HNH endonuclease | |||
| 20820 | R | EcoZ151ORF20895P (100% identity) | EcoFF68ORF20820P | |
| 20825 | McrC family protein | |||
| 21640 | porin family protein | |||
| 21645 | R | SflFF24DptFP (100% identity) | EcoFF68DptFP | |
| 21650 | DNA phosphorothioation-dependent restriction | |||
| 21645 | DNA phosphorothioation-dependent restriction | |||
| 21650 | R | SflFF24DptGP (100% identity) | EcoFF68DptGP | |
| 21655 | DNA phosphorothioation-dependent restriction | |||
| 21650 | DNA phosphorothioation-dependent restriction | |||
| 21655 | R | EcosEC5DptHP (100% identity) | EcoFF68DptHP | |
| 21660 | accessory gene regulator B family protein | |||
| 21670 | DGQHR domain-containing protein | |||
| 21675 | M | M.SflFF24DndEP (100% identity) | M.EcoFF68DndEP | |
| 21680 | DNA sulfur modification protein DndD | |||
| 21675 | DNA sulfur modification protein DndE | |||
| 21680 | M | M.SflFF24DndDP (100% identity) | M.EcoFF68DndDP | |
| 21685 | DNA phosphorothioation system sulfurtransferase | |||
| 21680 | DNA sulfur modification protein DndD | |||
| 21685 | M | M.SflFF24DndCP (100% identity) | M.EcoFF68DndCP | |
| 21690 | DNA sulfur modification protein DndB | |||
| 21685 | DNA phosphorothioation system sulfurtransferase | |||
| 21690 | M | M.SflFF24DndBP (100% identity) | M.EcoFF68DndBP | |
| 21695 | osmoprotectant transport activator ProQ | |||
| plasmid unnamed1 | ||||
| 24335 | IS6-like element IS26 family transposase | |||
| 24340 | R | Ssp3CORF24390P (100% identity) | CCWGG | EcoFF68ORF24345P |
| 24345 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.EcoFF68ORF24345P |
| 24350 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20820 | HNH endonuclease | |||
| 20825 | R | EcoZ151McrCP (100% identity) | EcoFF68McrCP | |
| 20830 | R | EcoZ151McrBP (100% identity) | EcoFF68McrBP | |
| 20835 | IS3-like element IS3 family transposase | |||