Escherichia coli ISHS7 |
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Putative Escherichia coli ISHS7 RM systems
Ref: Sung,I.S. et al. unpublished
REBASE ref # 33755
| Sequence length: | GenBank #: | |
| Chromosome: | 4,837,230 bp | CP092252 |
| plasmid pISHS7_1: | 84,986 bp | CP092253 |
| plasmid pISHS7_2: | 70,864 bp | CP092254 |
REBASE acronym: EcoISH57
Org_num: 55130
All begin MF614_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20365 | restriction endonuclease subunit M | |||
| 20370 | M | M.SsoSE61ORF6540P (57% identity) | RTCANNNNNNCTC | M.EcoISH57ORF20370AP |
| 20375 | IS3 family transposase | |||
| 20380 | M | M.EcoXD35ORF18215P (42% identity) | RTCANNNNNNCTC | M.EcoISH57ORF20370BP |
| 20385 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.EcoISH57ORF20370P |
| 20390 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | EcoISH57ORF20370P |
| 20400 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2475 | DUF2556 family protein | |||
| 2480 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoISH57ORF2480P |
| 2485 | DNA-binding transcriptional regulator Fis | |||
| 9315 | phosphohydrolase | |||
| 9320 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoISH57DcmP |
| 9325 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoISH57DcmP |
| 9330 | drug/metabolite exporter YedA | |||
| 11360 | DUF977 family protein | |||
| 11365 | M | M.Ecoi029ORF11125P (100% identity) | M.EcoISH57ORF11365P | |
| 11370 | 139 aa hypothetical protein | |||
| 20340 | HNH endonuclease | |||
| 20345 | R | EcoWCTORF19980P (100% identity) | EcoISH57ORF20345P | |
| 20350 | McrC family protein | |||
| plasmid pISHS7_1 | ||||
| 23390 | 103 aa hypothetical protein | |||
| 23395 | M | M.SflP099ORF24190P (100% identity) | M.EcoISH57ORF23395P | |
| 23400 | 73 aa hypothetical protein | |||
| plasmid pISHS7_2 | ||||
| 23910 | 73 aa hypothetical protein | |||
| 23915 | M | M.Xca80ORFEP (100% identity) | M.EcoISH57ORF23915P | |
| 23920 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20345 | HNH endonuclease | |||
| 20350 | R | EcoZ151McrCP (100% identity) | EcoISH57McrCP | |
| 20355 | R | SflSTLE4McrBP (100% identity) | EcoISH57McrBP | |
| 20360 | IS3-like element IS3 family transposase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7150 | recombination protein NinB | |||
| 7155 | M | M.SflLIN11ORF7170P (100% identity) | GATC | M.EcoISH57ORF7155P |
| 7160 | protein ninD | |||