Escherichia coli SWYHX138.33gt |
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Putative Escherichia coli SWYHX138.33gt RM systems
Ref: Hui,S.W. et al. unpublished
REBASE ref # 33410
| Sequence length: | GenBank #: | |
| Chromosome: | 4,612,612 bp | CP091836 |
| plasmid pHX138.33gt_1: | 76,063 bp | CP091837 |
REBASE acronym: Eco33gt
Org_num: 53934
All begin L7H17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 960 | IS66 family transposase | |||
| 965 | R | Eco261ftORF980P (100% identity) | Eco33gtORF985P | |
| 970 | S | S.EcosS1ORF17110P (50% identity) | S2.Eco33gtORF985P | |
| 975 | IS5 family transposase | |||
| 980 | S | S1.Eco261ftORF980P (100% identity) | S1.Eco33gtORF985P | |
| 985 | M | M.Eco261ftORF980P (100% identity) | M.Eco33gtORF985P | |
| 990 | GTPase family protein | |||
| 17495 | IS1-like element IS1B family transposase | |||
| 17500 | S | S.Eco261ftORF17510P (100% identity) | S.Eco33gtORF17505P | |
| 17505 | M | M.Eco261ftORF17510P (100% identity) | M.Eco33gtORF17505P | |
| 17510 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5375 | drug/metabolite exporter YedA | |||
| 5380 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.Eco33gtDcmP |
| 5385 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco33gtDcmP |
| 5390 | phosphohydrolase | |||
| 11925 | DNA-binding transcriptional regulator Fis | |||
| 11930 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco33gtORF11930P |
| 11935 | DUF2556 family protein | |||
| 12550 | ribulose-phosphate 3-epimerase | |||
| 12555 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco33gtDamP |
| 12560 | cell division protein DamX | |||
| 21670 | TraR/DksA family transcriptional regulator | |||
| 21675 | M | M.EfeC18ORF7705P (100% identity) | GATC | M.Eco33gtORF21675P |
| 21680 | 273 aa hypothetical protein | |||
| plasmid pHX138.33gt_1 | ||||
| 22545 | recombination-associated protein RdgC | |||
| 22550 | M | M.EcoF6097ORF8730P (97% identity) | M.Eco33gtORF22550P | |
| 22555 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15330 | 70 aa hypothetical protein | |||
| 15335 | M | M.Eco261ftORF15340P (100% identity) | M.Eco33gtORF15335P | |
| 15340 | DUF3850 domain-containing protein | |||