Escherichia coli NEC20 |
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Putative Escherichia coli NEC20 RM systems
Ref: Kumar,N.R. et al. unpublished
REBASE ref # 33393
Complete sequence: 5,055,567 bp
GenBank #: CP091171
REBASE acronym: EcoNEC20
Org_num: 53833
All begin L2W44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23395 | endoribonuclease SymE | |||
| 23400 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoNEC20ORF23405P |
| 23405 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoNEC20ORF23405P |
| 23410 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoNEC20ORF23405P |
| 23415 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10600 | drug/metabolite exporter YedA | |||
| 10605 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.EcoNEC20DcmP |
| 10610 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.EcoNEC20DcmP |
| 10615 | phosphohydrolase | |||
| 17635 | DNA-binding transcriptional regulator Fis | |||
| 17640 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoNEC20ORF17640P |
| 17645 | DUF2556 family protein | |||
| 18145 | ribulose-phosphate 3-epimerase | |||
| 18150 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoNEC20DamP |
| 18155 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23385 | R | SenHNK130McrCP (100% identity) | EcoNEC20McrCP | |
| 23390 | R | SenHNK130McrBP (100% identity) | EcoNEC20McrBP | |
| 23395 | endoribonuclease SymE | |||
| 23410 | type I restriction-modification system | |||
| 23415 | R | Ssp28760MrrP (100% identity) | EcoNEC20MrrP | |
| 23420 | GTPase | |||