Escherichia coli NEC19 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NEC19 RM systems
Ref: Kumar,N.R. et al. unpublished
REBASE ref # 33393
Complete sequence: 4,996,618 bp
GenBank #: CP091170
REBASE acronym: EcoNEC19
Org_num: 53831
All begin L2W43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23400 | endoribonuclease SymE | |||
| 23405 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoNEC19ORF23410P |
| 23410 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.EcoNEC19ORF23410P |
| 23415 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoNEC19ORF23410P |
| 23420 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9445 | 50 aa hypothetical protein | |||
| 9465 | M | M.EcoUS12ORF13970P (100% identity) | A | M.EcoNEC19ORF9465P |
| 9470 | TrmB family transcriptional regulator | |||
| 9470 | TrmB family transcriptional regulator | |||
| 9475 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoNEC19ORF9485P |
| 9480 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcoNEC19ORF9485P |
| 9485 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoNEC19ORF9485P |
| 9490 | antitermination protein | |||
| 13340 | PerC family transcriptional regulator | |||
| 13345 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoNEC19ORF13345P |
| 13350 | serine/threonine protein phosphatase | |||
| 17205 | DNA-binding transcriptional regulator Fis | |||
| 17210 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoNEC19ORF17210P |
| 17215 | DUF2556 family protein | |||
| 17785 | ribulose-phosphate 3-epimerase | |||
| 17790 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoNEC19DamP |
| 17795 | cell division protein DamX | |||
| 22735 | BREX system P-loop protein BrxC | |||
| 22740 | RM | Kpn24835ORF14810P (100% identity) | EcoNEC19ORF22740P | |
| 22745 | BREX-1 system phosphatase PglZ type A | |||
| 23220 | 109 aa hypothetical protein | |||
| 23225 | R | EcoT073ORF21650P (100% identity) | EcoNEC19ORF23225P | |
| 23230 | HNH endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5630 | recombination protein NinB | |||
| 5635 | M | M.EcosC25ORF16305P (99% identity) | GATC | M.EcoNEC19ORF5635P |
| 5640 | NinE family protein | |||