Escherichia coli NEC18 |
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Putative Escherichia coli NEC18 RM systems
Ref: Kumar,N.R. et al. unpublished
REBASE ref # 33393
Complete sequence: 4,849,845 bp
GenBank #: CP091169
REBASE acronym: EcoNEC18
Org_num: 53830
All begin L2W40_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | tyrosine-type recombinase/integrase | |||
| 1320 | M | M.KpnFF77ORF20840P (100% identity) | GGTACC | M.EcoNEC18ORF1320P |
| 1325 | zinc ribbon domain-containing protein | |||
| 5010 | 71 aa hypothetical protein | |||
| 5015 | M | M.KpnYN1ORFGP (89% identity) | M.EcoNEC18ORF5015P | |
| 5020 | helix-turn-helix domain-containing protein | |||
| 8075 | DUF3927 family protein | |||
| 8090 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoNEC18ORF8090P |
| 8095 | TrmB family transcriptional regulator | |||
| 16755 | DNA-binding transcriptional regulator Fis | |||
| 16760 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoNEC18ORF16760P |
| 16765 | DUF2556 family protein | |||
| 17315 | ribulose-phosphate 3-epimerase | |||
| 17320 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoNEC18DamP |
| 17325 | cell division protein DamX | |||
| 22275 | helix-turn-helix domain-containing protein | |||
| 22280 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoNEC18ORF22280P |
| 22285 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoNEC18ORF22280P |
| 22290 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoNEC18ORF22280P |
| 22295 | McrC family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22290 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 22295 | R | EcosS9McrCP (100% identity) | EcoNEC18McrCP | |
| 22300 | R | EcosS3McrBP (100% identity) | EcoNEC18McrBP | |
| 22305 | glycosyltransferase | |||