Escherichia coli NEC14 |
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Putative Escherichia coli NEC14 RM systems
Ref: Kumar,N.R. et al. unpublished
REBASE ref # 33393
Complete sequence: 4,817,002 bp
GenBank #: CP091166
REBASE acronym: EcoNEC14
Org_num: 53827
All begin L2W35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1275 | ash family protein | |||
| 1280 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoNEC14ORF1285P |
| 1285 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoNEC14ORF1285P |
| 1290 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoNEC14ORF1285P |
| 1295 | type IV toxin-antitoxin system AbiEi family | |||
| 1400 | group II intron reverse transcriptase/maturase | |||
| 1405 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoNEC14ORF1415P |
| 1410 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoNEC14ORF1415P |
| 1415 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoNEC14ORF1415P |
| 1420 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16510 | DNA-binding transcriptional regulator Fis | |||
| 16515 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoNEC14ORF16515P |
| 16520 | DUF2556 family protein | |||
| 17085 | ribulose-phosphate 3-epimerase | |||
| 17090 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoNEC14DamP |
| 17095 | cell division protein DamX | |||
| 21920 | 97 aa hypothetical protein | |||
| 21925 | R | Ecos19ORF20635P (100% identity) | EcoNEC14ORF21925P | |
| 21930 | response regulator receiver domain | |||
| 21935 | ATP-binding protein | |||
| 21940 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoNEC14ORF21940P |
| 21945 | 174 aa hypothetical protein | |||
| 22175 | helix-turn-helix domain-containing protein | |||
| 22180 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoNEC14ORF22180P |
| 22185 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoNEC14ORF22180P |
| 22190 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoNEC14ORF22180P |
| 22195 | McrC family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22190 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 22195 | R | EcosS9McrCP (100% identity) | EcoNEC14McrCP | |
| 22200 | R | EcosS3McrBP (100% identity) | EcoNEC14McrBP | |
| 22205 | glycosyltransferase | |||