Escherichia coli Nissle 1917 |
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Putative Escherichia coli Nissle 1917 RM systems
Ref: Sproer,C. et al. unpublished
REBASE ref # 33365
Complete sequence: 5,055,406 bp
GenBank #: CP058217
REBASE acronym: Eco1917a
Org_num: 53840
All begin HW372_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20250 | restriction endonuclease | |||
| 20255 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco1917aORF20255P |
| 20260 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco1917aORF20255P |
| 20265 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco1917aORF20255P |
| 20270 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2375 | DUF2556 family protein | |||
| 2380 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1917aORF2380P |
| 2385 | DNA-binding transcriptional regulator Fis | |||
| 9635 | phosphohydrolase | |||
| 9640 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1917aDcmP |
| 9645 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.Eco1917aDcmP |
| 9650 | drug/metabolite exporter YedA | |||
| 10155 | conserved phage C-terminal domain-containing | |||
| 10160 | M | M.EcoZE21ORF10305P (99% identity) | M.Eco1917aORF10160P | |
| 10165 | RusA family crossover junction | |||
| 10195 | TrmB family transcriptional regulator | |||
| 10200 | M | M.EcoZE21ORF10265P (100% identity) | M.Eco1917aORF10200P | |
| 10205 | holin | |||
| 20600 | McrC family protein | |||
| 20605 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1917aORF20610P |
| 20610 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco1917aORF20610P |
| 20615 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco1917aORF20610P |
| 20620 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20580 | glycosyltransferase family 2 protein | |||
| 20585 | R | EcosS3McrBP (72% identity) | Eco1917aMcrBP | |
| 20590 | IS3-like element ISEc52 family transposase | |||
| 20595 | restriction endonuclease | |||
| 20600 | R | EcosS9McrCP (100% identity) | Eco1917aMcrCP | |
| 20605 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13790 | NinE family protein | |||
| 13795 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1917aORF13795P |
| 13800 | recombination protein NinB | |||