Escherichia coli NCCP12480 |
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Putative Escherichia coli NCCP12480 RM systems
Ref: An,Y.W. et al. unpublished
REBASE ref # 33389
Complete sequence: 4,523,730 bp
GenBank #: CP068680
REBASE acronym: Eco12480
Org_num: 53813
All begin JKV47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9230 | DNA-binding protein | |||
| 9235 | M | M.Ecos641ORF18845P (100% identity) | M.Eco12480ORF9235P | |
| 9240 | S | S.EcoWH398ORF26840P (100% identity) | S.Eco12480ORF9235P | |
| 9245 | R | EcoW087ORF4400P (100% identity) | Eco12480ORF9235P | |
| 9250 | lactate utilization protein C | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1760 | RusA family crossover junction | |||
| 1765 | M | M.Eco9015ORF4018P (60% identity) | M.Eco12480ORF1765P | |
| 1770 | PerC family transcriptional regulator | |||
| 2085 | HNH endonuclease | |||
| 2090 | R | Sso8ORF19860P (100% identity) | Eco12480ORF2090P | |
| 2095 | 100 aa hypothetical protein | |||
| 7590 | DUF2556 family protein | |||
| 7595 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco12480ORF7595P |
| 7600 | DNA-binding transcriptional regulator Fis | |||
| 14060 | phosphohydrolase | |||
| 14065 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco12480DcmP |
| 14070 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco12480DcmP |
| 14075 | drug/metabolite exporter YedA | |||
| 16050 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco12480ORF16055P | |
| 16060 | 95 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2095 | 100 aa hypothetical protein | |||
| 2100 | R | SflN116ORF19490P (100% identity) | GAACC | Eco12480ORF2105P |
| 2105 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.Eco12480ORF2105P |
| 2110 | DEAD/DEAH box helicase family protein | |||