Escherichia coli 1162T7 |
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Putative Escherichia coli 1162T7 RM systems
Ref: Cevallos,M.A. et al. unpublished
REBASE ref # 33265
| Sequence length: | GenBank #: | |
| Chromosome: | 5,023,946 bp | CP051661 |
| plasmid pEco1162T7a: | 148,312 bp | CP051662 |
REBASE acronym: Eco1162T7
Org_num: 53259
All begin HH201_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16705 | endoribonuclease SymE | |||
| 16710 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco1162T7ORF16720P |
| 16715 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco1162T7ORF16720P |
| 16720 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco1162T7ORF16720P |
| 16725 | restriction endonuclease | |||
| 18435 | ash family protein | |||
| 18440 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco1162T7ORF18445P |
| 18445 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco1162T7ORF18445P |
| 18450 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco1162T7ORF18445P |
| 18455 | 267 aa hypothetical protein | |||
| plasmid pEco1162T7a | ||||
| 25265 | IS1 family transposase | |||
| 25270 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco1162T7ORF25280P |
| 25275 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco1162T7ORF25280P |
| 25280 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco1162T7ORF25280P |
| 25285 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3410 | drug/metabolite exporter YedA | |||
| 3415 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco1162T7DcmP |
| 3420 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco1162T7DcmP |
| 3425 | phosphohydrolase | |||
| 10640 | DNA-binding transcriptional regulator Fis | |||
| 10645 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1162T7ORF10645P |
| 10650 | DUF2556 family protein | |||
| 11240 | ribulose-phosphate 3-epimerase | |||
| 11245 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1162T7DamP |
| 11250 | cell division protein DamX | |||
| 16350 | helix-turn-helix domain-containing protein | |||
| 16355 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco1162T7ORF16355P |
| 16360 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco1162T7ORF16355P |
| 16365 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1162T7ORF16355P |
| 16370 | McrC family protein | |||
| 22210 | 71 aa hypothetical protein | |||
| 22215 | M | M.KpnYN1ORFGP (89% identity) | M.Eco1162T7ORF22215P | |
| 22220 | helix-turn-helix transcriptional regulator | |||
| 24460 | TrmB family transcriptional regulator | |||
| 24465 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco1162T7ORF24465P |
| 24480 | DUF3927 family protein | |||
| plasmid pEco1162T7a | ||||
| 25205 | 73 aa hypothetical protein | |||
| 25210 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco1162T7ORF25210P |
| 25215 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16365 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16370 | R | EcosS9McrCP (100% identity) | Eco1162T7McrCP | |
| 16375 | R | EcosS3McrBP (100% identity) | Eco1162T7McrBP | |
| 16380 | glycosyltransferase family 2 protein | |||