Escherichia coli STEC032 |
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Putative Escherichia coli STEC032 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 33407
Complete sequence: 4,983,337 bp
GenBank #: CP061272
REBASE acronym: EcoSTEC032
Org_num: 53892
All begin H6S06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3610 | endoribonuclease SymE | |||
| 3615 | R | Eco786605ORF4280P (100% identity) | GATANNNNNNTCC | EcoSTEC032ORF3625P |
| 3620 | S | S.Eco786605ORF4280P (99% identity) | GATANNNNNNTCC | S.EcoSTEC032ORF3625P |
| 3625 | M | M.Eco786605ORF4280P (99% identity) | GATANNNNNNTCC | M.EcoSTEC032ORF3625P |
| 3630 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3420 | type III restriction-modification system | |||
| 3425 | R | EcosLF82ORF3205P (99% identity) | EcoSTEC032ORF3425P | |
| 3430 | sialate O-acetylesterase | |||
| 3880 | replication protein | |||
| 3885 | M | M.Eco9030ORF2336P (100% identity) | GATC | M.EcoSTEC032ORF3885P |
| 3890 | RusA family crossover junction | |||
| 10820 | TrmB family transcriptional regulator | |||
| 10825 | M | M.EcoR12ORF25425P (100% identity) | M.EcoSTEC032ORF10825P | |
| 10840 | IS1-like element IS1A family transposase | |||
| 11820 | Com family DNA-binding transcriptional | |||
| 11825 | M | M.EcoSO173ORF23940P (70% identity) | M.EcoSTEC032ORF11825P | |
| 11830 | IS21-like element IS100 family transposase | |||
| 15775 | NinE family protein | |||
| 15780 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoSTEC032ORF15780P |
| 15785 | recombination protein NinB | |||
| 17220 | Rha family transcriptional regulator | |||
| 17225 | R | Sso1099IP (93% identity) | CTGCAG | EcoSTEC032ORF17230P |
| 17230 | M | M.EcoPV0671ORF1581P (100% identity) | CTGCAG | M.EcoSTEC032ORF17230P |
| 17235 | LexA family transcriptional regulator | |||
| 17430 | regulator | |||
| 17435 | M | M.Eco786605ORF18430P (100% identity) | GATC | M.EcoSTEC032ORF17435P |
| 17440 | DUF1382 family protein | |||
| 18320 | PerC family transcriptional regulator | |||
| 18325 | M | M.EcoTCM3e1ORF6790P (94% identity) | M.EcoSTEC032ORF18325P | |
| 18330 | DUF1382 family protein | |||
| 22490 | DNA-binding transcriptional regulator Fis | |||
| 22495 | M | M.Eco786605ORF23490P (100% identity) | ATGCAT | M.EcoSTEC032ORF22495P |
| 22500 | DUF2556 family protein | |||
| 23090 | ribulose-phosphate 3-epimerase | |||
| 23095 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSTEC032DamP |
| 23100 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3400 | 94 aa hypothetical protein | |||
| 3405 | M | M.EcosLF82ORF3195P (18% identity) | M.EcoSTEC032ORF3405AP | |
| 3410 | IS1-like element IS1A family transposase | |||
| 3415 | M | M.EcosLF82ORF3195P (52% identity) | M.EcoSTEC032ORF3405BP | |
| 3420 | R | EcosLF82ORF3195P (99% identity) | EcoSTEC032ORF3405P | |
| 3425 | HNH endonuclease | |||