Escherichia coli STEC174 |
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Putative Escherichia coli STEC174 RM systems
Ref: Yanyu,P. unpublished
REBASE ref # 33408
Complete sequence: 4,825,942 bp
GenBank #: CP060107
REBASE acronym: EcoSTEC174
Org_num: 53898
All begin H6S12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9140 | 134 aa hypothetical protein | |||
| 9145 | R | EcoSTEC413ORF5080P (100% identity) | EcoSTEC174ORF9155P | |
| 9150 | S | S.EcoSTEC413ORF5080P (100% identity) | S.EcoSTEC174ORF9155P | |
| 9155 | M | M.EcoSTEC413ORF5080P (99% identity) | M.EcoSTEC174ORF9155P | |
| 9160 | 496 aa hypothetical protein | |||
| 9960 | AAA family ATPase | |||
| 9965 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoSTEC174ORF9970P |
| 9970 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoSTEC174ORF9970P |
| 9975 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoSTEC174ORF9970P |
| 9980 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14210 | cell division protein DamX | |||
| 14215 | M | M.EcoSTEC413DamP (100% identity) | GATC | M.EcoSTEC174DamP |
| 14220 | ribulose-phosphate 3-epimerase | |||
| 14835 | DUF2556 family protein | |||
| 14840 | M | M.EcoSTEC413ORF22670P (100% identity) | ATGCAT | M.EcoSTEC174ORF14840P |
| 14845 | DNA-binding transcriptional regulator Fis | |||
| 21255 | phosphohydrolase | |||
| 21260 | M | M.SspS13DcmP (97% identity) | CCWGG | M.EcoSTEC174DcmP |
| 21265 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoSTEC174DcmP |
| 21270 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2660 | IS3 family transposase | |||
| 2665 | R | EcosEC27McrCP (99% identity) | EcoSTEC174McrCP | |
| 2670 | R | EcoUKMcrBP (100% identity) | EcoSTEC174McrBP | |
| 2675 | recombinase family protein | |||