Escherichia coli STEC636 |
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Putative Escherichia coli STEC636 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 33407
| Sequence length: | GenBank #: | |
| Chromosome: | 4,997,950 bp | CP061212 |
| plasmid pSTEC636_1: | 197,376 bp | CP061213 |
| plasmid pSTEC636_2: | 133,451 bp | CP061214 |
REBASE acronym: EcoSTEC636
Org_num: 53920
All begin H6S27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21730 | IS3 family transposase | |||
| 21735 | M | M.Ecos4422ORF22930P (100% identity) | M.EcoSTEC636ORF21735P | |
| 21740 | S | S.Ecos4422ORF22930P (100% identity) | S.EcoSTEC636ORF21735P | |
| 21745 | R | Ecos4422ORF22930P (100% identity) | EcoSTEC636ORF21735P | |
| 21755 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1905 | cell division protein DamX | |||
| 1910 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSTEC636DamP |
| 1915 | ribulose-phosphate 3-epimerase | |||
| 2460 | DUF2556 family protein | |||
| 2465 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoSTEC636ORF2465P |
| 2470 | DNA-binding transcriptional regulator Fis | |||
| 9255 | phosphohydrolase | |||
| 9260 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoSTEC636DcmP |
| 9265 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoSTEC636DcmP |
| 9270 | drug/metabolite exporter YedA | |||
| 9820 | TrmB family transcriptional regulator | |||
| 9825 | M | M.EcoSTEC1014ORF10715P (100% identity) | M.EcoSTEC636ORF9825P | |
| 9845 | DUF1737 domain-containing protein | |||
| 16625 | replication endonuclease | |||
| 16630 | M | M.Sen30575ORF16925P (99% identity) | GATC | M.EcoSTEC636ORF16630P |
| 16635 | TraR/DksA family transcriptional regulator | |||
| 17245 | NinE family protein | |||
| 17250 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoSTEC636ORF17250P |
| 17255 | recombination protein NinB | |||
| plasmid pSTEC636_1 | ||||
| 24530 | DNA-binding protein | |||
| 24535 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoSTEC636ORF24535P |
| 24540 | 284 aa hypothetical protein | |||
| 25335 | thermonuclease family protein | |||
| 25340 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoSTEC636ORF25340P |
| 25345 | 55 aa hypothetical protein | |||
| plasmid pSTEC636_2 | ||||
| 25975 | IS110-like element ISShdy1 family transposase | |||
| 25980 | M | M.EcoSO40ORF26750P (100% identity) | SAY | M.EcoSTEC636ORF25980P |
| 25985 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14460 | isocitrate dehydrogenase | |||
| 14465 | R | Efe1438GmrSDP (100% identity) | EcoSTEC636GmrSDP | |
| 14470 | recombinase family protein | |||