Escherichia coli STEC648 |
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Putative Escherichia coli STEC648 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 33407
| Sequence length: | GenBank #: | |
| Chromosome: | 5,291,250 bp | CP061836 |
| plasmid pSTEC648_1: | 116,216 bp | CP061837 |
REBASE acronym: EcoSTEC648
Org_num: 53923
All begin H6S30_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1760 | cell division protein DamX | |||
| 1765 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSTEC648DamP |
| 1770 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.SspS13ORF21055P (99% identity) | ATGCAT | M.EcoSTEC648ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 4055 | conjugal transfer protein TraG N-terminal | |||
| ??? | M | M2.EcoA41ORF21415P (99% identity) | M1.EcoSTEC648ORF4060P | |
| ??? | M | M1.EcoA41ORF21415P (99% identity) | GGCGGA | M2.EcoSTEC648ORF4060P |
| 4085 | R | EcoA41ORF21415P (29% identity) | GGCGGA | EcoSTEC648ORF4060AP |
| 4090 | R | EcoA41ORF21415P (41% identity) | GGCGGA | EcoSTEC648ORF4060BP |
| 4095 | transposase | |||
| 9885 | phosphohydrolase | |||
| 9890 | M | M.EcoVCSW8DcmP (100% identity) | CCWGG | M.EcoSTEC648DcmP |
| 9895 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoSTEC648DcmP |
| 9900 | drug/metabolite exporter YedA | |||
| 12425 | TrmB family transcriptional regulator | |||
| 12430 | M | M.SflC32ORFBP (100% identity) | M.EcoSTEC648ORF12430P | |
| 12450 | tellurite resistance protein | |||
| 12490 | 49 aa hypothetical protein | |||
| 12495 | M | M.Eco1317ORF15150P (99% identity) | M.EcoSTEC648ORF12495P | |
| 12500 | 62 aa hypothetical protein | |||
| 14530 | cell envelope integrity protein TolA | |||
| 14545 | M | M.Eco1590ORF14580P (100% identity) | M.EcoSTEC648ORF14545P | |
| 14550 | TrmB family transcriptional regulator | |||
| 16180 | DUF1737 domain-containing protein | |||
| 16185 | M | M.EcoST130ORF10820P (98% identity) | M.EcoSTEC648ORF16185P | |
| 16190 | TrmB family transcriptional regulator | |||
| 17130 | replication endonuclease | |||
| 17135 | M | M.EfeTORF14810P (100% identity) | GATC | M.EcoSTEC648ORF17135P |
| 17140 | TraR/DksA family transcriptional regulator | |||
| plasmid pSTEC648_1 | ||||
| 26250 | 73 aa hypothetical protein | |||
| 26255 | M | M.Kpn1026ORFJP (100% identity) | M.EcoSTEC648ORF26255P | |
| 26260 | 98 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22170 | 100 aa hypothetical protein | |||
| 22175 | R | Ecocs03ORF12815P (100% identity) | GAGCC | EcoSTEC648ORF22180P |
| 22180 | M | M.Ecocs03ORF12815P (99% identity) | GAGCC | M.EcoSTEC648ORF22180P |
| 22185 | DEAD/DEAH box helicase family protein | |||