Escherichia coli O2:H1 HM670 |
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Putative Escherichia coli O2:H1 HM670 RM systems
Ref: Wang,J. et al. PLoS One 16 (10), e0259141 (2021)
REBASE ref # 33388
Complete sequence: 5,139,616 bp
GenBank #: CP082772
REBASE acronym: EcoHM670
Org_num: 53857
All begin K8B93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3850 | endoribonuclease SymE | |||
| 3855 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoHM670ORF3860P |
| 3860 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.EcoHM670ORF3860P |
| 3865 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoHM670ORF3860P |
| 3870 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3675 | 109 aa hypothetical protein | |||
| 3680 | R | EcoT073ORF21650P (100% identity) | EcoHM670ORF3680P | |
| 3685 | HNH endonuclease | |||
| 22065 | DNA-binding transcriptional regulator Fis | |||
| 22070 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoHM670ORF22070P |
| 22075 | DUF2556 family protein | |||
| 22665 | ribulose-phosphate 3-epimerase | |||
| 22670 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoHM670DamP |
| 22675 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3625 | integrase arm-type DNA-binding domain-containing | |||
| 3630 | R | EcoUTI89IP (100% identity) | CACAG | EcoHM670ORF3635P |
| 3635 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoHM670ORF3635P |
| 3640 | ATP-binding domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10325 | recombination protein NinB | |||
| 10330 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoHM670ORF10330P |
| 10335 | NinE family protein | |||