Escherichia coli O16:H6 CU37RT-2 |
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Putative Escherichia coli O16:H6 CU37RT-2 RM systems
Ref: Wang,J. et al. PLoS One 16 (10), e0259141 (2021)
REBASE ref # 33388
Complete sequence: 5,015,239 bp
GenBank #: CP082774
REBASE acronym: Eco37RT2
Org_num: 53854
All begin K8B88_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2490 | integrase | |||
| 2495 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco37RT2ORF2495P |
| 2500 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco37RT2ORF2495P |
| 2505 | transposase | |||
| 3535 | IS3 family transposase | |||
| 3540 | R | EcoSCU125ORF12165P (100% identity) | Eco37RT2ORF3540P | |
| 3545 | sigma 54-interacting transcriptional regulator | |||
| 10355 | TrmB family transcriptional regulator | |||
| 10360 | M | M.EcoSCU125ORF5530P (100% identity) | A | M.Eco37RT2ORF10360P |
| 10380 | DUF1737 domain-containing protein | |||
| 17085 | NinE family protein | |||
| 17090 | M | M.Eco9172ORFGP (94% identity) | GATC | M.Eco37RT2ORF17090P |
| 17095 | recombination protein NinB | |||
| 21955 | tyrosine-type recombinase/integrase | |||
| 21960 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco37RT2ORF21960P |
| 21965 | DUF2556 family protein | |||
| 22555 | ribulose-phosphate 3-epimerase | |||
| 22560 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco37RT2DamP |
| 22565 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14720 | shufflon system plasmid conjugative transfer | |||
| 14725 | R | Sensp14178ORF9290P (100% identity) | CAAACC | Eco37RT2ORF14730P |
| 14730 | M | M.Sensp14178ORF9290P (100% identity) | CAAACC | M.Eco37RT2ORF14730P |
| 14735 | integrase arm-type DNA-binding domain-containing | |||