Escherichia coli E-T67-1 |
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Putative Escherichia coli E-T67-1 RM systems
Ref: Chen,J. et al. unpublished
REBASE ref # 33373
| Sequence length: | GenBank #: | |
| Chromosome: | 5,142,461 bp | CP090264 |
| plasmid pE-T67-1-IMP-4: | 52,202 bp | CP090265 |
| plasmid punnamed1: | 150,874 bp | CP090266 |
REBASE acronym: EcoET671
Org_num: 53705
All begin LZT38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17720 | endoribonuclease SymE | |||
| 17725 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoET671ORF17735P |
| 17730 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoET671ORF17735P |
| 17735 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoET671ORF17735P |
| 17740 | restriction endonuclease | |||
| 19545 | ash family protein | |||
| 19550 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoET671ORF19555P |
| 19555 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoET671ORF19555P |
| 19560 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoET671ORF19555P |
| 19565 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2885 | TrmB family transcriptional regulator | |||
| 2890 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoET671ORF2900P |
| 2895 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcoET671ORF2900P |
| 2900 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoET671ORF2900P |
| 2905 | antitermination protein | |||
| 7520 | 121 aa hypothetical protein | |||
| 7525 | R | Sso8033ORF3755P (100% identity) | CCWGG | EcoET671ORF7530P |
| 7530 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.EcoET671ORF7530P |
| 7535 | 257 aa hypothetical protein | |||
| 7660 | phage lysis protein EssD | |||
| 7665 | M | M.EcosR6ORF7985P (100% identity) | M.EcoET671ORF7665P | |
| 7670 | 95 aa hypothetical protein | |||
| 7705 | LexA family transcriptional regulator | |||
| 7710 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoET671ORF7710P |
| 7715 | PerC family transcriptional regulator | |||
| 11390 | DNA-binding transcriptional regulator Fis | |||
| 11395 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoET671ORF11395P |
| 11400 | DUF2556 family protein | |||
| 11990 | ribulose-phosphate 3-epimerase | |||
| 11995 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoET671DamP |
| 12000 | cell division protein DamX | |||
| 23045 | 71 aa hypothetical protein | |||
| 23050 | M | M.KpnYN1ORFGP (89% identity) | M.EcoET671ORF23050P | |
| 23055 | helix-turn-helix domain-containing protein | |||
| 25330 | TrmB family transcriptional regulator | |||
| 25335 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoET671ORF25335P |
| 25350 | DUF3927 family protein | |||
| plasmid pE-T67-1-IMP-4 | ||||
| 25595 | IS1 family transposase | |||
| 25600 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoET671ORF25600P |
| 25605 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoET671ORF25600P |
| 25610 | EAL domain-containing protein | |||
| plasmid punnamed1 | ||||
| 26575 | 73 aa hypothetical protein | |||
| 26580 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoET671ORF26580P | |
| 26585 | 103 aa hypothetical protein | |||