Escherichia coli O25:H1 CU39ES-1 |
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Putative Escherichia coli O25:H1 CU39ES-1 RM systems
Ref: Wang,J. et al. PLoS One 16 (10), e0259141 (2021)
REBASE ref # 33388
Complete sequence: 5,124,020 bp
GenBank #: CP082777
REBASE acronym: Eco39ES1
Org_num: 53855
All begin K8B91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3890 | endoribonuclease SymE | |||
| 3895 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.Eco39ES1ORF3900P |
| 3900 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.Eco39ES1ORF3900P |
| 3905 | R | EcoUTI89IIP (99% identity) | GAGNNNNNNNGTCA | Eco39ES1ORF3900P |
| 3910 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1760 | PerC family transcriptional regulator | |||
| 1765 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco39ES1ORF1765P |
| 1770 | LexA family transcriptional regulator | |||
| 1800 | 67 aa hypothetical protein | |||
| 1805 | M | M.EcoSP5ORF17940P (100% identity) | M.Eco39ES1ORF1805P | |
| 1810 | phage lysis protein EssD | |||
| 3735 | 109 aa hypothetical protein | |||
| 3740 | R | EcoT073ORF21650P (100% identity) | Eco39ES1ORF3740P | |
| 3745 | HNH endonuclease | |||
| 10295 | 71 aa hypothetical protein | |||
| 10300 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco39ES1ORF10300P | |
| 10305 | helix-turn-helix domain-containing protein | |||
| 14780 | drug/metabolite exporter YedA | |||
| 14785 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.Eco39ES1DcmP |
| 14790 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco39ES1DcmP |
| 14795 | phosphohydrolase | |||
| 21825 | DNA-binding transcriptional regulator Fis | |||
| 21830 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco39ES1ORF21830P |
| 21835 | DUF2556 family protein | |||
| 22425 | ribulose-phosphate 3-epimerase | |||
| 22430 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco39ES1DamP |
| 22435 | cell division protein DamX | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10865 | recombination protein NinB | |||
| 10870 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco39ES1ORF10870P |
| 10875 | NinE family protein | |||