Escherichia coli UCS1.1 |
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Putative Escherichia coli UCS1.1 RM systems
Ref: Terwilliger,A. et al. Viruses 13 (10), 2049 (2021)
REBASE ref # 33413
Complete sequence: 5,109,228 bp
GenBank #: CP084678
REBASE acronym: EcoUCS11
Org_num: 53939
All begin LDM94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1515 | ash family protein | |||
| 1520 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoUCS11ORF1525P |
| 1525 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoUCS11ORF1525P |
| 1530 | R | EcoUCS1ORF1520P (100% identity) | AAAGNNNNGTT | EcoUCS11ORF1525P |
| 1535 | type IV toxin-antitoxin system AbiEi family | |||
| 24680 | endoribonuclease SymE | |||
| 24685 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoUCS11ORF24695P |
| 24690 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoUCS11ORF24695P |
| 24695 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoUCS11ORF24695P |
| 24700 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5010 | 72 aa hypothetical protein | |||
| 5015 | M | M.KpnYN1ORFGP (88% identity) | M.EcoUCS11ORF5015P | |
| 5020 | helix-turn-helix domain-containing protein | |||
| 7275 | TrmB family transcriptional regulator | |||
| 7280 | M | M.EcosS9ORF10680P (99% identity) | A | M.EcoUCS11ORF7280P |
| 7295 | DUF3927 family protein | |||
| 10850 | drug/metabolite exporter YedA | |||
| 10855 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoUCS11DcmP |
| 10860 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoUCS11DcmP |
| 10865 | phosphohydrolase | |||
| 18315 | DNA-binding transcriptional regulator Fis | |||
| 18320 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoUCS11ORF18320P |
| 18325 | DUF2556 family protein | |||
| 18905 | ribulose-phosphate 3-epimerase | |||
| 18910 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoUCS11DamP |
| 18915 | cell division protein DamX | |||
| 20450 | BREX system P-loop protein BrxC | |||
| 20455 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoUCS11ORF20455P |
| 20460 | BREX-1 system phosphatase PglZ type A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24350 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 24355 | R | EcosS9McrCP (100% identity) | EcoUCS11McrCP | |
| 24360 | R | EcosS3McrBP (100% identity) | EcoUCS11McrBP | |
| 24365 | glycosyltransferase | |||