Escherichia coli UCS1 |
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Putative Escherichia coli UCS1 RM systems
Ref: Terwilliger,A. et al. Viruses 13 (10), 2049 (2021)
REBASE ref # 33413
Complete sequence: 5,109,337 bp
GenBank #: CP084679
REBASE acronym: EcoUCS1
Org_num: 53938
All begin LDM95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1510 | ash family protein | |||
| 1515 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoUCS1ORF1520P |
| 1520 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoUCS1ORF1520P |
| 1525 | R | EcoUCS11ORF1525P (100% identity) | AAAGNNNNGTT | EcoUCS1ORF1520P |
| 1530 | type IV toxin-antitoxin system AbiEi family | |||
| 24610 | endoribonuclease SymE | |||
| 24615 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoUCS1ORF24625P |
| 24620 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoUCS1ORF24625P |
| 24625 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoUCS1ORF24625P |
| 24630 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5005 | 72 aa hypothetical protein | |||
| 5010 | M | M.KpnYN1ORFGP (87% identity) | M.EcoUCS1ORF5010P | |
| 5015 | helix-turn-helix domain-containing protein | |||
| 7265 | TrmB family transcriptional regulator | |||
| 7270 | M | M.EcosS9ORF10680P (99% identity) | A | M.EcoUCS1ORF7270P |
| 7285 | DUF3927 family protein | |||
| 10820 | drug/metabolite exporter YedA | |||
| 10825 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoUCS1DcmP |
| 10830 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoUCS1DcmP |
| 10835 | phosphohydrolase | |||
| 18270 | DNA-binding transcriptional regulator Fis | |||
| 18275 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoUCS1ORF18275P |
| 18280 | DUF2556 family protein | |||
| 18855 | ribulose-phosphate 3-epimerase | |||
| 18860 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoUCS1DamP |
| 18865 | cell division protein DamX | |||
| 20390 | BREX system P-loop protein BrxC | |||
| 20395 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoUCS1ORF20395P |
| 20400 | BREX-1 system phosphatase PglZ type A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24275 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 24280 | R | EcosS9McrCP (100% identity) | EcoUCS1McrCP | |
| 24285 | R | EcosS3McrBP (100% identity) | EcoUCS1McrBP | |
| 24290 | glycosyltransferase | |||