Escherichia coli D17EC0331 |
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Putative Escherichia coli D17EC0331 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
Complete sequence: 5,129,070 bp
GenBank #: CP088889
REBASE acronym: EcoEC0331
Org_num: 53695
All begin LQT84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12190 | IS3 family transposase | |||
| 12195 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoEC0331ORF12195P |
| 12200 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoEC0331ORF12195P |
| 12205 | YecA family protein | |||
| 12210 | cold shock domain-containing protein | |||
| 12215 | R | Ecoppa2ORF22455P (100% identity) | GATGNNNNNNTAC | EcoEC0331ORF12195P |
| 12220 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4870 | DUF2556 family protein | |||
| 4875 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.EcoEC0331ORF4875P |
| 4880 | DNA-binding transcriptional regulator Fis | |||
| 11935 | phosphohydrolase | |||
| 11940 | M | M.Ecoppa2DcmP (100% identity) | CCWGG | M.EcoEC0331DcmP |
| 11945 | V | V.Ecoppa2DcmP (100% identity) | V.EcoEC0331DcmP | |
| 11950 | drug/metabolite exporter YedA | |||
| 15220 | DUF1367 family protein | |||
| 15225 | R | EcosEC21ORF11865P (100% identity) | GTCGAC | EcoEC0331ORF15230P |
| 15230 | M | M.EcoS1268ORF11970P (100% identity) | GTCGAC | M.EcoEC0331ORF15230P |
| 15235 | DUF977 family protein | |||
| 20055 | DUF1317 domain-containing protein | |||
| 20060 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoEC0331ORF20060P |
| 20065 | cell division protein ZapA | |||
| 23525 | RM | EcoZ30ORF19095P (100% identity) | EcoEC0331ORF23525P | |
| 23530 | DEAD/DEAH box helicase | |||
| 23565 | HNH endonuclease | |||
| 23570 | R | Ecoppa2ORF12035P (100% identity) | EcoEC0331ORF23570P | |
| 23575 | 286 aa hypothetical protein | |||
| 24490 | integrase | |||
| 24495 | R | SflFF24DptFP (100% identity) | EcoEC0331DptFP | |
| 24500 | DNA phosphorothioation-dependent restriction | |||
| 24495 | DNA phosphorothioation-dependent restriction | |||
| 24500 | R | SflFF24DptGP (100% identity) | EcoEC0331DptGP | |
| 24505 | DNA phosphorothioation-dependent restriction | |||
| 24500 | DNA phosphorothioation-dependent restriction | |||
| 24505 | R | EcosEC5DptHP (99% identity) | EcoEC0331DptHP | |
| 24510 | accessory gene regulator B family protein | |||
| 24520 | DGQHR domain-containing protein | |||
| 24525 | M | M.EcoC1723DndEP (100% identity) | M.EcoEC0331DndEP | |
| 24530 | DNA sulfur modification protein DndD | |||
| 24525 | DNA sulfur modification protein DndE | |||
| 24530 | M | M.SflFF24DndDP (100% identity) | M.EcoEC0331DndDP | |
| 24535 | DNA phosphorothioation system sulfurtransferase | |||
| 24530 | DNA sulfur modification protein DndD | |||
| 24535 | M | M.SflFF24DndCP (100% identity) | M.EcoEC0331DndCP | |
| 24540 | DNA sulfur modification protein DndB | |||
| 24535 | DNA phosphorothioation system sulfurtransferase | |||
| 24540 | M | M.SflFF24DndBP (100% identity) | M.EcoEC0331DndBP | |
| 24545 | osmoprotectant transport activator ProQ | |||