Escherichia coli E16EC0945 |
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Putative Escherichia coli E16EC0945 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,174,454 bp | CP088887 |
| plasmid pE16EC0945-1: | 69,248 bp | CP088888 |
REBASE acronym: EcoC0945
Org_num: 53734
All begin LQQ79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13345 | endoribonuclease SymE | |||
| 13350 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0945ORF13360P |
| 13355 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0945ORF13360P |
| 13360 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0945ORF13360P |
| 13365 | restriction endonuclease | |||
| 15430 | ash family protein | |||
| 15435 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0945ORF15440P |
| 15440 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0945ORF15440P |
| 15445 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0945ORF15440P |
| 15450 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pE16EC0945-1 | ||||
| 25700 | type II toxin-antitoxin system Phd/YefM family | |||
| 25705 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0945ORF25705P | |
| 25710 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6760 | DNA-binding transcriptional regulator Fis | |||
| 6765 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0945ORF6765P |
| 6770 | DUF2556 family protein | |||
| 7360 | ribulose-phosphate 3-epimerase | |||
| 7365 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0945DamP |
| 7370 | cell division protein DamX | |||
| 8885 | BREX system P-loop protein BrxC | |||
| 8890 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoC0945ORF8890P |
| 8895 | BREX-1 system phosphatase PglZ type A | |||
| 12050 | conjugal transfer protein TraG N-terminal | |||
| 12055 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0945ORF12055P | |
| 12060 | R | EcosS3ORF15775P (100% identity) | EcoC0945ORF12055P | |
| 12065 | response regulator receiver domain | |||
| 15215 | PerC family transcriptional regulator | |||
| 15220 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0945ORF15220P |
| 15225 | LexA family transcriptional regulator | |||
| 15260 | 95 aa hypothetical protein | |||
| 15265 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0945ORF15265P | |
| 15270 | phage lysis protein EssD | |||
| 19385 | phosphohydrolase | |||
| 19390 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0945DcmP |
| 19395 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0945DcmP |
| 19400 | drug/metabolite exporter YedA | |||
| 22930 | DUF3927 family protein | |||
| 22945 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0945ORF22945P |
| 22950 | TrmB family transcriptional regulator | |||
| 25240 | helix-turn-helix domain-containing protein | |||
| 25245 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0945ORF25245P | |
| 25250 | 71 aa hypothetical protein | |||
| plasmid pE16EC0945-1 | ||||
| 25765 | 103 aa hypothetical protein | |||
| 25770 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0945ORF25770P |
| 25775 | 73 aa hypothetical protein | |||