Escherichia coli F16EC0653 |
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Putative Escherichia coli F16EC0653 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,348,274 bp | CP088879 |
| plasmid pF16EC0653-2: | 164,198 bp | CP088881 |
REBASE acronym: EcoEC0653
Org_num: 53794
All begin LQR17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4110 | endoribonuclease SymE | |||
| 4115 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoEC0653ORF4125P |
| 4120 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoEC0653ORF4125P |
| 4125 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoEC0653ORF4125P |
| 4130 | restriction endonuclease | |||
| 5935 | ash family protein | |||
| 5940 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoEC0653ORF5945P |
| 5945 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoEC0653ORF5945P |
| 5950 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoEC0653ORF5945P |
| 5955 | type IV toxin-antitoxin system AbiEi family | |||
| 10325 | 75 aa hypothetical protein | |||
| 10330 | R | EcosEC2ORF13930P (100% identity) | EcoEC0653ORF10340P | |
| 10335 | S | S.EcosEC2ORF13930P (100% identity) | S.EcoEC0653ORF10340P | |
| 10340 | M | M.EcosS1ORF17110P (100% identity) | M.EcoEC0653ORF10340P | |
| 10345 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2460 | conjugal transfer protein TraG N-terminal | |||
| 2465 | M | M.EcosS3ORF15775P (100% identity) | M.EcoEC0653ORF2465P | |
| 2470 | R | EcosS3ORF15775P (100% identity) | EcoEC0653ORF2465P | |
| 2475 | response regulator receiver domain | |||
| 3755 | helix-turn-helix domain-containing protein | |||
| 3760 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoEC0653ORF3760P |
| 3765 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoEC0653ORF3760P |
| 3770 | R | R1.EcoS4ORF17760P (100% identity) | GGTCTC | EcoEC0653ORF3760BP |
| 3775 | IS3-like element ISEc52 family transposase | |||
| 3780 | R | EcosS9ORF2810P (33% identity) | GGTCTC | EcoEC0653ORF3760AP |
| 3785 | McrC family protein | |||
| 9440 | 71 aa hypothetical protein | |||
| 9445 | M | M.KpnYN1ORFGP (89% identity) | M.EcoEC0653ORF9445P | |
| 9450 | helix-turn-helix domain-containing protein | |||
| 12085 | TrmB family transcriptional regulator | |||
| 12090 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoEC0653ORF12090P |
| 12105 | DUF3927 family protein | |||
| 15080 | TrmB family transcriptional regulator | |||
| 15085 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoEC0653ORF15095P |
| 15090 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcoEC0653ORF15095P |
| 15095 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoEC0653ORF15095P |
| 15100 | antitermination protein | |||
| 15970 | drug/metabolite exporter YedA | |||
| 15975 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoEC0653DcmP |
| 15980 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoEC0653DcmP |
| 15985 | phosphohydrolase | |||
| 23765 | DNA-binding transcriptional regulator Fis | |||
| 23770 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEC0653ORF23770P |
| 23775 | DUF2556 family protein | |||
| 24365 | ribulose-phosphate 3-epimerase | |||
| 24370 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEC0653DamP |
| 24375 | cell division protein DamX | |||
| plasmid pF16EC0653-2 | ||||
| 27410 | 73 aa hypothetical protein | |||
| 27415 | M | M.Kpn121ORF28445P (100% identity) | M.EcoEC0653ORF27415P | |
| 27420 | 103 aa hypothetical protein | |||