Escherichia coli UTI89 |
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Putative Escherichia coli UTI89 RM systems
Ref: Chen,S.L. et al. Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5977-5982 (2006)
REBASE ref # 9386
| Sequence length: | GenBank #: | |
| Chromosome: | 5,065,741 bp | CP000243 (NC_007946) |
| plasmid pUTI89: | 114,230 bp | CP000244 (NC_007941) |
REBASE acronym: EcoUT
Org_num: 4296
All begin UTI89_C, UTI89_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5049 | 113 aa hypothetical protein | |||
| 5050 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoUTI |
| 5051 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.EcoUTI |
| 5052 | 36 aa hypothetical protein | |||
| 5053 | R | EcosS1ORF16790P (99% identity) | CCANNNNNNNCTTC | EcoUTI |
| 5054 | Mrr protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1293 | NinB protein encoded within prophage | |||
| 1294 | M | M.EcoleORFAP (100% identity) | GATC | M.EcoUTORF1294P |
| 1295 | NinE protein (phage 82- and lambda-like) | |||
| 1480 | 65 aa hypothetical protein | |||
| 1481 | M | M.SboBSORF1444P (100% identity) | M.EcoUTORF1481P | |
| 1484 | 87 aa hypothetical protein | |||
| 2160 | transmembrane subunit | |||
| 2161 | V | V.SflC32DcmP (74% identity) | V.EcoUTDcmP | |
| 2162 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.EcoUTDcmP |
| 2163 | 240 aa hypothetical protein | |||
| 2997 | 108 aa hypothetical protein | |||
| 2998 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoUTORF2998P |
| 2999 | 164 aa hypothetical protein | |||
| 3703 | site-specific DNA inversion stimulation factor; | |||
| 3704 | M | M.EcoO25bORF2479P (100% identity) | ATGCAT | M.EcoUTORF3704P |
| 3705 | 68 aa hypothetical protein YhdU | |||
| 3884 | D-ribulose-5-phosphate 3-epimerase | |||
| 3885 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoUTDamP |
| 3886 | membrane protein | |||
| 4937 | 986 aa hypothetical protein | |||
| 4938 | M | M.EcosS3ORF15775P (100% identity) | M.EcoUTORF4938P | |
| 4939 | 81 aa hypothetical protein | |||
| 5101 | 164 aa hypothetical protein | |||
| 5102 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoUTORF5102P |
| 5103 | 108 aa hypothetical protein | |||
| 5109 | prophage CP-933O conserved hypothetical protein | |||
| 5110 | M | M.Ecos142ORF20090P (100% identity) | M.EcoUTORF5110P | |
| 5111 | lambdoid prophage DLP12 lysis protein S-like | |||
| plasmid pUTI89 | ||||
| 74 | 103 aa hypothetical protein | |||
| 75 | M | M.Sfl0030ORFCP (100% identity) | M.EcoUTORF75P | |
| 76 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2959 | prophage CP-933H unknown protein | |||
| 2960 | R | EspFAAGmrSDP (100% identity) | EcoUTGmrSDP | |
| 2961 | 147 aa hypothetical protein | |||
| 5047 | 306 aa hypothetical protein YfcI | |||
| 5048 | R | EcoKE51GmrSDP (98% identity) | EcoUTGmrSD2P | |
| 5049 | 113 aa hypothetical protein | |||
| 5053 | endonuclease R | |||
| 5054 | R | EcosS1MrrP (100% identity) | EcoUTMrrP | |
| 5055 | 331 aa hypothetical protein YjiA | |||