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Putative Phytobacter diazotrophicus TA9734 RM systems
Ref: Kubota,H. et al. unpublished
REBASE ref # 33665
Sequence length: | GenBank #: | |
Chromosome: | 5,709,362 bp | AP025334 |
plasmid pTMTA97341: | 174,856 bp | AP025335 |
plasmid pTMTA97342: | 174,343 bp | AP025336 |
REBASE acronym: Pdi9734
Org_num: 54855
All begin PDTA9734_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19570 | 397 aa hypothetical protein | |||
19580 | M | M.Pdi9832ORF19550P (100% identity) | M.Pdi9734ORF19580P | |
19590 | S | S1.Pdi9832ORF19550P (100% identity) | S1.Pdi9734ORF19580P | |
19600 | IS5 family transposase | |||
19610 | S | S2.Pdi9832ORF19550P (100% identity) | S2.Pdi9734ORF19580P | |
19620 | 203 aa hypothetical protein | |||
19630 | 594 aa hypothetical protein | |||
19640 | R | Pdi9832ORF19550P (100% identity) | Pdi9734ORF19580P | |
19650 | metal-dependent hydrolase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4070 | cell division protein DamX | |||
4080 | M | M.PspSCO41DamP (100% identity) | GATC | M.Pdi9734DamP |
4090 | ribulose-phosphate 3-epimerase | |||
11280 | LysR family transcriptional regulator | |||
11290 | M | M.PspSCO41ORFAP (100% identity) | CCWGG | M.Pdi9734ORF11290P |
11300 | 213 aa hypothetical protein | |||
11430 | 75 aa hypothetical protein | |||
11440 | M | M.Pdi9832ORF11440P (100% identity) | M.Pdi9734ORF11440P | |
11450 | replication endonuclease | |||
18450 | 86 aa hypothetical protein | |||
18460 | M | M.Pdi9832ORF18430P (100% identity) | M.Pdi9734ORF18460P | |
18470 | serine protease | |||
33310 | 55 aa hypothetical protein | |||
33320 | M | M.Pdi9832ORF32950P (100% identity) | M.Pdi9734ORF33320P | |
33330 | 86 aa hypothetical protein | |||
33330 | 86 aa hypothetical protein | |||
33340 | M | M.Pdi9832ORF32970P (100% identity) | M.Pdi9734ORF33340P | |
33350 | 162 aa hypothetical protein | |||
47360 | TonB-dependent receptor | |||
47370 | RM | Pdi9832ORF47000P (100% identity) | Pdi9734ORF47380P | |
47380 | M | M.Pdi9832ORF47000P (100% identity) | M.Pdi9734ORF47380P | |
47390 | 31 aa hypothetical protein | |||
plasmid pTMTA97341 | ||||
54930 | IS110 family transposase | |||
54940 | R | Pdi9832ORF54580P (100% identity) | Pdi9734ORF54950P | |
54950 | M | M.Pdi9832ORF54580P (100% identity) | M.Pdi9734ORF54950P | |
54960 | methyltransferase | |||
54950 | cytosine-specific methyltransferase | |||
54960 | M | M.Pdi9832ORF54590P (100% identity) | M.Pdi9734ORF54960P | |
54970 | 73 aa hypothetical protein | |||
plasmid pTMTA97342 | ||||
57540 | 100 aa hypothetical protein | |||
57550 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Pdi9734ORF57550P |
57560 | 143 aa hypothetical protein |