Rhodococcus pyridinivorans DNHP-S2 |
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Putative Rhodococcus pyridinivorans DNHP-S2 RM systems
Ref: Dueholm,M.S. unpublished
REBASE ref # 33744
| Sequence length: | GenBank #: | |
| Chromosome: | 4,829,321 bp | CP088975 |
| plasmid unnamed1: | 150,504 bp | CP088976 |
| plasmid unnamed2: | 67,375 bp | CP088977 |
REBASE acronym: RpyS2
Org_num: 55103
All begin LSF60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16470 | IS3 family transposase | |||
| 16475 | M | M.RaeP1ORF10660P (91% identity) | M.RpyS2ORF16475P | |
| 16480 | 199 aa hypothetical protein | |||
| 16485 | S | S.RspP14ORFDP (50% identity) | S.RpyS2ORF16475P | |
| 16490 | R | RaeP1ORF10660P (90% identity) | RpyS2ORF16475P | |
| 16495 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 655 | pseudogene | |||
| 660 | M | M.RpyAK37ORF17940P (99% identity) | CTCGAG | M.RpyS2ORF660P |
| 665 | V | V.RbiB403ORF1190P (88% identity) | V.RpyS2ORF660P | |
| 670 | acyl-CoA dehydrogenase family protein | |||
| plasmid unnamed2 | ||||
| 23495 | DUF3883 domain-containing protein | |||
| 23500 | M | M.RrhLHB3ORFAP (99% identity) | M.RpyS2ORF23500P | |
| 23505 | DUF499 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 23160 | 223 aa hypothetical protein | |||
| 23165 | R | Rpy44McrB3P (99% identity) | RpyS2McrBP | |
| 23170 | R | RgoDND3McrCP (98% identity) | RpyS2McrCP | |
| 23175 | 74 aa hypothetical protein | |||