Escherichia coli A16EC0210 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli A16EC0210 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,138,302 bp | CP088864 |
| plasmid pA16EC0210-1: | 95,189 bp | CP088865 |
REBASE acronym: EcoC0210
Org_num: 53583
All begin LQT90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24650 | type IV toxin-antitoxin system AbiEi family | |||
| 24655 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0210ORF24660P |
| 24660 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0210ORF24660P |
| 24665 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0210ORF24660P |
| 24670 | ash family protein | |||
| plasmid pA16EC0210-1 | ||||
| 25620 | type II toxin-antitoxin system Phd/YefM family | |||
| 25625 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0210ORF25625P | |
| 25630 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | McrC family protein | |||
| 1650 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0210ORF1655P |
| 1655 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0210ORF1655P |
| 1660 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0210ORF1655P |
| 1665 | helix-turn-helix domain-containing protein | |||
| 7055 | cell division protein DamX | |||
| 7060 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0210DamP |
| 7065 | ribulose-phosphate 3-epimerase | |||
| 7655 | DUF2556 family protein | |||
| 7660 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0210ORF7660P |
| 7665 | DNA-binding transcriptional regulator Fis | |||
| 12030 | DUF1382 family protein | |||
| 12035 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0210ORF12035P |
| 12040 | PerC family transcriptional regulator | |||
| 15405 | phosphohydrolase | |||
| 15410 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0210DcmP |
| 15415 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0210DcmP |
| 15420 | drug/metabolite exporter YedA | |||
| 18960 | DUF3927 family protein | |||
| 18975 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0210ORF18975P |
| 18980 | TrmB family transcriptional regulator | |||
| 21240 | helix-turn-helix domain-containing protein | |||
| 21245 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0210ORF21245P | |
| 21250 | 71 aa hypothetical protein | |||
| 24830 | phage lysis protein EssD | |||
| 24835 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0210ORF24835P | |
| 24840 | 95 aa hypothetical protein | |||
| 24875 | LexA family transcriptional regulator | |||
| 24880 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0210ORF24880P |
| 24885 | PerC family transcriptional regulator | |||
| plasmid pA16EC0210-1 | ||||
| 25685 | 103 aa hypothetical protein | |||
| 25690 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0210ORF25690P |
| 25695 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1635 | IS3-like element ISEc52 family transposase | |||
| 1640 | R | EcosS3McrBP (100% identity) | EcoC0210McrBP | |
| 1645 | R | EcosS9McrCP (100% identity) | EcoC0210McrCP | |
| 1650 | Alw26I/Eco31I/Esp3I family type II restriction | |||