Escherichia coli A17EC0026 |
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Putative Escherichia coli A17EC0026 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,134,039 bp | CP088829 |
| plasmid pA17EC0026-1: | 107,064 bp | CP088831 |
| plasmid pA17EC0026-2: | 107,833 bp | CP088830 |
| plasmid pA17EC0026-3: | 97,024 bp | CP088832 |
REBASE acronym: EcoC0026
Org_num: 53592
All begin LQR05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4015 | endoribonuclease SymE | |||
| 4020 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0026ORF4030P |
| 4025 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0026ORF4030P |
| 4030 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0026ORF4030P |
| 4035 | restriction endonuclease | |||
| 6095 | ash family protein | |||
| 6100 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0026ORF6105P |
| 6105 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0026ORF6105P |
| 6110 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0026ORF6105P |
| 6115 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pA17EC0026-2 | ||||
| 25310 | type II toxin-antitoxin system Phd/YefM family | |||
| 25315 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0026ORF25315P | |
| 25320 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2720 | conjugal transfer protein TraG N-terminal | |||
| 2725 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0026ORF2725P | |
| 2730 | R | EcosS3ORF15775P (100% identity) | EcoC0026ORF2725P | |
| 2735 | response regulator receiver domain | |||
| 5880 | PerC family transcriptional regulator | |||
| 5885 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0026ORF5885P |
| 5890 | LexA family transcriptional regulator | |||
| 5925 | 95 aa hypothetical protein | |||
| 5930 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0026ORF5930P | |
| 5935 | phage lysis protein EssD | |||
| 9590 | 71 aa hypothetical protein | |||
| 9595 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0026ORF9595P | |
| 9600 | helix-turn-helix domain-containing protein | |||
| 11880 | TrmB family transcriptional regulator | |||
| 11885 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0026ORF11885P |
| 11900 | DUF3927 family protein | |||
| 18535 | PerC family transcriptional regulator | |||
| 18540 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0026ORF18540P |
| 18545 | DUF1382 family protein | |||
| 22570 | DNA-binding transcriptional regulator Fis | |||
| 22575 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0026ORF22575P |
| 22580 | DUF2556 family protein | |||
| 23170 | ribulose-phosphate 3-epimerase | |||
| 23175 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0026DamP |
| 23180 | cell division protein DamX | |||
| 24695 | BREX system P-loop protein BrxC | |||
| 24700 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoC0026ORF24700P |
| 24705 | BREX-1 system phosphatase PglZ type A | |||
| plasmid pA17EC0026-2 | ||||
| 25375 | 103 aa hypothetical protein | |||
| 25380 | M | M.UbapRSB107ORFAP (99% identity) | M.EcoC0026ORF25380P | |
| 25385 | 73 aa hypothetical protein | |||
| plasmid pA17EC0026-3 | ||||
| 26810 | SPFH/Band 7/PHB domain protein | |||
| 26825 | M | M.Eco127AORF26950P (99% identity) | M.EcoC0026ORF26825P | |
| 26830 | recombination-associated protein RdgC | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pA17EC0026-1 | ||||
| 25850 | 76 aa hypothetical protein | |||
| 25855 | M | M.Sso524ORF460P (100% identity) | GATC | M.EcoC0026ORF25855P |
| 25860 | 269 aa hypothetical protein | |||