Escherichia coli A16EC0780 |
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Putative Escherichia coli A16EC0780 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,204,821 bp | CP088837 |
| plasmid pA16EC0780-1: | 118,627 bp | CP088838 |
REBASE acronym: EcoC0780
Org_num: 53589
All begin LQT27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3740 | endoribonuclease SymE | |||
| 3745 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0780ORF3755P |
| 3750 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0780ORF3755P |
| 3755 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0780ORF3755P |
| 3760 | restriction endonuclease | |||
| 5825 | ash family protein | |||
| 5830 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0780ORF5835P |
| 5835 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0780ORF5835P |
| 5840 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0780ORF5835P |
| 5845 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pA16EC0780-1 | ||||
| 25510 | IS1-like element IS1A family transposase | |||
| 25515 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0780ORF25515P | |
| 25520 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2435 | conjugal transfer protein TraG N-terminal | |||
| 2440 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0780ORF2440P | |
| 2445 | R | EcosS3ORF15775P (100% identity) | EcoC0780ORF2440P | |
| 2450 | response regulator receiver domain | |||
| 5610 | PerC family transcriptional regulator | |||
| 5615 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0780ORF5615P |
| 5620 | LexA family transcriptional regulator | |||
| 5655 | 95 aa hypothetical protein | |||
| 5660 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0780ORF5660P | |
| 5665 | phage lysis protein EssD | |||
| 9325 | 71 aa hypothetical protein | |||
| 9330 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0780ORF9330P | |
| 9335 | helix-turn-helix domain-containing protein | |||
| 11605 | TrmB family transcriptional regulator | |||
| 11610 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0780ORF11610P |
| 11625 | DUF3927 family protein | |||
| 18275 | PerC family transcriptional regulator | |||
| 18280 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0780ORF18280P |
| 18285 | DUF1382 family protein | |||
| 22625 | DNA-binding transcriptional regulator Fis | |||
| 22630 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0780ORF22630P |
| 22635 | DUF2556 family protein | |||
| 23225 | ribulose-phosphate 3-epimerase | |||
| 23230 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0780DamP |
| 23235 | cell division protein DamX | |||
| 24750 | BREX system P-loop protein BrxC | |||
| 24755 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoC0780ORF24755P |
| 24760 | BREX-1 system phosphatase PglZ type A | |||
| plasmid pA16EC0780-1 | ||||
| 26175 | 73 aa hypothetical protein | |||
| 26180 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0780ORF26180P |
| 26185 | 103 aa hypothetical protein | |||