Escherichia coli B16EC0346 |
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Putative Escherichia coli B16EC0346 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,122,389 bp | CP088802 |
| plasmid pB16EC0346-1: | 146,716 bp | CP088803 |
REBASE acronym: EcoC0346
Org_num: 53606
All begin LQT44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18590 | type IV toxin-antitoxin system AbiEi family | |||
| 18595 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0346ORF18600P |
| 18600 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0346ORF18600P |
| 18605 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0346ORF18600P |
| 18610 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | PerC family transcriptional regulator | |||
| 1815 | M | M.EcoC0214ORF1810P (100% identity) | GATC | M.EcoC0346ORF1815P |
| 1820 | LexA family transcriptional regulator | |||
| 1850 | 67 aa hypothetical protein | |||
| 1855 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0346ORF1855P | |
| 1860 | phage lysis protein EssD | |||
| 2860 | conjugal transfer protein TraG N-terminal | |||
| 2865 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0346ORF2865P | |
| 2870 | R | EcosS3ORF15775P (100% identity) | EcoC0346ORF2865P | |
| 2875 | response regulator receiver domain | |||
| 3850 | 97 aa hypothetical protein | |||
| 3855 | R | Ecos19ORF20635P (100% identity) | EcoC0346ORF3855P | |
| 3860 | response regulator receiver domain | |||
| 3865 | ATP-binding protein | |||
| 3870 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC0346ORF3870P |
| 3875 | 174 aa hypothetical protein | |||
| 4140 | helix-turn-helix domain-containing protein | |||
| 4145 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0346ORF4145P |
| 4150 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0346ORF4145P |
| 4155 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0346ORF4145P |
| 4160 | McrC family protein | |||
| 10165 | phosphohydrolase | |||
| 10170 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC0346DcmP |
| 10175 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0346DcmP |
| 10180 | drug/metabolite exporter YedA | |||
| 14365 | DUF3927 family protein | |||
| 14380 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoC0346ORF14380P |
| 14385 | TrmB family transcriptional regulator | |||
| 22340 | DNA-binding transcriptional regulator Fis | |||
| 22345 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0346ORF22345P |
| 22350 | DUF2556 family protein | |||
| 22960 | ribulose-phosphate 3-epimerase | |||
| 22965 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0346DamP |
| 22970 | cell division protein DamX | |||
| plasmid pB16EC0346-1 | ||||
| 24895 | 73 aa hypothetical protein | |||
| 24900 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC0346ORF24900P |
| 24905 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9965 | shufflon system plasmid conjugative transfer | |||
| 9970 | R | Ecost88ORF24685P (100% identity) | EcoC0346ORF9975P | |
| 9975 | M | M.EcosS2ORF3675P (100% identity) | M.EcoC0346ORF9975P | |
| 9980 | SpnT protein | |||