Escherichia coli B16EC0493 |
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Putative Escherichia coli B16EC0493 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,082,410 bp | CP088795 |
| plasmid pB16EC0493-2: | 146,746 bp | CP088796 |
REBASE acronym: EcoC0493
Org_num: 53608
All begin LQR14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6015 | ash family protein | |||
| 6020 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0493ORF6025P |
| 6025 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0493ORF6025P |
| 6030 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0493ORF6025P |
| 6035 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2790 | conjugal transfer protein TraG N-terminal | |||
| 2795 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0493ORF2795P | |
| 2800 | R | EcosS3ORF15775P (100% identity) | EcoC0493ORF2795P | |
| 2805 | response regulator receiver domain | |||
| 3785 | 97 aa hypothetical protein | |||
| 3790 | R | Ecos19ORF20635P (100% identity) | EcoC0493ORF3790P | |
| 3795 | response regulator receiver domain | |||
| 3800 | ATP-binding protein | |||
| 3805 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC0493ORF3805P |
| 3810 | 166 aa hypothetical protein | |||
| 4075 | helix-turn-helix domain-containing protein | |||
| 4080 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0493ORF4080P |
| 4085 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0493ORF4080P |
| 4090 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0493ORF4080P |
| 4095 | McrC family protein | |||
| 10240 | TrmB family transcriptional regulator | |||
| 10245 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoC0493ORF10245P |
| 10260 | DUF3927 family protein | |||
| 14460 | drug/metabolite exporter YedA | |||
| 14465 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0493DcmP |
| 14470 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC0493DcmP |
| 14475 | phosphohydrolase | |||
| 22320 | DNA-binding transcriptional regulator Fis | |||
| 22325 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0493ORF22325P |
| 22330 | DUF2556 family protein | |||
| 22940 | ribulose-phosphate 3-epimerase | |||
| 22945 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0493DamP |
| 22950 | cell division protein DamX | |||
| plasmid pB16EC0493-2 | ||||
| 24975 | 73 aa hypothetical protein | |||
| 24980 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC0493ORF24980P |
| 24985 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14660 | SpnT protein | |||
| 14665 | M | M.EcosS2ORF3675P (100% identity) | M.EcoC0493ORF14665P | |
| 14670 | R | Ecost88ORF24685P (100% identity) | EcoC0493ORF14665P | |
| 14675 | shufflon system plasmid conjugative transfer | |||