Escherichia coli A17EC0350 |
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Putative Escherichia coli A17EC0350 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
Complete sequence: 5,144,607 bp
GenBank #: CP088820
REBASE acronym: EcoC0350
Org_num: 53596
All begin LQT09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10175 | IS3 family transposase | |||
| 10180 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoC0350ORF10180P |
| 10185 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoC0350ORF10180P |
| 10190 | YecA family protein | |||
| 10195 | cold shock domain-containing protein | |||
| 10200 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | EcoC0350ORF10180P |
| 10205 | M48 family metallopeptidase | |||
| 22105 | SIR2 family protein | |||
| 22110 | S | S.Ecoi68ORF3737P (98% identity) | GGANNNNNNCTTT | S.EcoC0350ORF22115P |
| 22115 | M | M.Ecoi68ORF3737P (100% identity) | GGANNNNNNCTTT | M.EcoC0350ORF22115P |
| 22120 | R | EcoFu014ORF1555P (100% identity) | GGANNNNNNCTTT | EcoC0350ORF22115P |
| 22125 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2555 | DUF2556 family protein | |||
| 2560 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.EcoC0350ORF2560P |
| 2565 | DNA-binding transcriptional regulator Fis | |||
| 9915 | phosphohydrolase | |||
| 9920 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.EcoC0350DcmP |
| 9925 | V | V.Ecos142DcmP (100% identity) | V.EcoC0350DcmP | |
| 9930 | drug/metabolite exporter YedA | |||
| 13655 | DUF3927 family protein | |||
| 13670 | M | M.SsoL4094ORF17545P (100% identity) | A | M.EcoC0350ORF13670P |
| 13675 | TrmB family transcriptional regulator | |||
| 16090 | replication endonuclease | |||
| 16095 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoC0350ORF16095P |
| 16100 | TraR/DksA family transcriptional regulator | |||
| 22945 | LexA family transcriptional regulator | |||
| 22950 | M | M.SflN101ORF11410P (100% identity) | GATC | M.EcoC0350ORF22950P |
| 22955 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21240 | 100 aa hypothetical protein | |||
| 21245 | R | SflN116ORF19490P (100% identity) | EcoC0350ORF21250P | |
| 21250 | M | M.Eco4BL09ORF40610P (100% identity) | M.EcoC0350ORF21250P | |
| 21255 | IS1 family transposase | |||